Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474228

Identifier: 113474228

GI number: 113474228

Start: 534200

End: 535810

Strand: Direct

Name: 113474228

Synonym: Tery_0345

Alternate gene names: NA

Gene position: 534200-535810 (Clockwise)

Preceding gene: 113474227

Following gene: 113474233

Centisome position: 6.89

GC content: 38.42

Gene sequence:

>1611_bases
ATGAAAAAATTAAAATTTTTAATTACTGGTGTCACTGTCATTGCAGCAGGTAGTTTTGCTACATATCTTTACTTTAAAAA
TATAGCAATTAAGGTATCTAGTCCCCTTAACAGTGGCCAAATTGTGCCAGAATCAGCAATTATGGCTGCTTTTTTTCATC
CTAATCAAAAAGCCATCACTAAATTACAACAATTTGGTACTCCTGAAGCAAAAAAGTTGATTAGTCAAAATTATGCAGAA
TTTCAGCAAGAAAATTTAGCTGAGGCTAATATTAATTGGGAAAAGGATATTCAATCTTGGTTGGGAGGAGTAATGTTAGC
TTTTGTACCTGGTGAGGAAGGACAAGATATGGATCCTGTAAATCTTTTGATGGTAGTAGGAATTAAAAATAAATTAGAAG
CTTTAAGATTTGTTAGTAAGTTCAAAGGTGAAGGGGAAAATAGGGTAATAAAGAGAAAATATCAAGGGGTGACTATTCGA
GAAATTACTGATGAGAGCAGGAAAACTTTTAATGTAGCAATTTTGGGAGATTACTTGGCGATCGCTCCCATCCCAGCAGT
AGTAGAAAGTGCTATTGACACCTTTCAGGGTAAGAGTGTTTCTCTGAGTCAAAATGCTCCTGAAACTTTACAGCAAAATA
CGGAGCTTGAAAATACTATTGCTACTATTTTTATTCCTAACTATATTCAGTTAATCACACAATTTACAGATGATTTGCCA
GAGGATCAAAGTTCTTCTAGTACTGGTTTAGAGCAATTCCAGCAAATAAATTCTGTCGTAATGGGAATAGGGGTTGATGA
TGCAGGTGTGCGGTTGCGAGCGGTGACTAAGTTAGTTTCTCCATTGCCTCTAGAGTTAACTAAACCTGCATCGGAGAAAA
TTTTGCAACGCTTTCCGGCGGAGACAATGATATCGCTCAGTGGCATTGGAGTTAGTCAAAGTTGGTCCCAGCTTGTAACC
CAAGCACAGGAAAATCAGGATTTGCAGGATGCTTTGGGTATTGTGAGAAATTCTTTTAAAGAAGTAGGCTTTGATGTAGA
TCGAGAGGTGTTTAGTTGGATGGATGGAGAATTTGCCCTTGGTTTGATAGCATCAAATAAGGGAATATTAGCAACAACTG
GGGTTGGTGCGGCAATGGTTTTTGAGACTAGCGATCGCTCTACTGCCGAAGCCACATTGAAAAAGTTAAATCAGATGGCG
AGCCAAAAGAAAGGTGTGGTGGTTGAGGAAAAACAGATAGGAGATCAGTTGGTGACGGAATTGCAAATGCTTGGTATTGG
TACATTTTTGGGATATGGGTGGTTGGATAATAATACGTTGTTTGTAGCAATGGGGAAACCATTAATAGAAGTAATGATGA
GTATGCCTGAGAATAGTTTAATTGGTAGTGAAAGTTTTGAGGAAATTAGGAGATCTTTACCCAAGTCGAATCAGGGGTAT
TTTTATTGGGACATCAAGCAAAGCATGGTTTGGGTGAAGCGTTATCCGTTTGTAAGTGTCTTGATACCATCGGAAGTGAG
AGCAATTTTGAATTCAATTCGAGGTATTGGGGTTACGGCGAGTTGGTTGGATGAGTTGACAAATGAGATGGAGATGTTGT
TGGCGTTGTAG

Upstream 100 bases:

>100_bases
ACAAGGTTCTCAAACCCTTATGCTCCAATTTAAAAATTAGTATGCATTTTTAGATTGGTATGTATTTTTAGAGAGGTCTA
ATGTAACAAAAATAATCTCT

Downstream 100 bases:

>100_bases
GAGGAGGATATTTTTAGGACTAATACAGTTTCATAAAACCTCCAAGTCAAAATTCAAAACTCATCCCTGACTGAATTTCA
ATATTGAATAAAGATACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKKLKFLITGVTVIAAGSFATYLYFKNIAIKVSSPLNSGQIVPESAIMAAFFHPNQKAITKLQQFGTPEAKKLISQNYAE
FQQENLAEANINWEKDIQSWLGGVMLAFVPGEEGQDMDPVNLLMVVGIKNKLEALRFVSKFKGEGENRVIKRKYQGVTIR
EITDESRKTFNVAILGDYLAIAPIPAVVESAIDTFQGKSVSLSQNAPETLQQNTELENTIATIFIPNYIQLITQFTDDLP
EDQSSSSTGLEQFQQINSVVMGIGVDDAGVRLRAVTKLVSPLPLELTKPASEKILQRFPAETMISLSGIGVSQSWSQLVT
QAQENQDLQDALGIVRNSFKEVGFDVDREVFSWMDGEFALGLIASNKGILATTGVGAAMVFETSDRSTAEATLKKLNQMA
SQKKGVVVEEKQIGDQLVTELQMLGIGTFLGYGWLDNNTLFVAMGKPLIEVMMSMPENSLIGSESFEEIRRSLPKSNQGY
FYWDIKQSMVWVKRYPFVSVLIPSEVRAILNSIRGIGVTASWLDELTNEMEMLLAL

Sequences:

>Translated_536_residues
MKKLKFLITGVTVIAAGSFATYLYFKNIAIKVSSPLNSGQIVPESAIMAAFFHPNQKAITKLQQFGTPEAKKLISQNYAE
FQQENLAEANINWEKDIQSWLGGVMLAFVPGEEGQDMDPVNLLMVVGIKNKLEALRFVSKFKGEGENRVIKRKYQGVTIR
EITDESRKTFNVAILGDYLAIAPIPAVVESAIDTFQGKSVSLSQNAPETLQQNTELENTIATIFIPNYIQLITQFTDDLP
EDQSSSSTGLEQFQQINSVVMGIGVDDAGVRLRAVTKLVSPLPLELTKPASEKILQRFPAETMISLSGIGVSQSWSQLVT
QAQENQDLQDALGIVRNSFKEVGFDVDREVFSWMDGEFALGLIASNKGILATTGVGAAMVFETSDRSTAEATLKKLNQMA
SQKKGVVVEEKQIGDQLVTELQMLGIGTFLGYGWLDNNTLFVAMGKPLIEVMMSMPENSLIGSESFEEIRRSLPKSNQGY
FYWDIKQSMVWVKRYPFVSVLIPSEVRAILNSIRGIGVTASWLDELTNEMEMLLAL
>Mature_536_residues
MKKLKFLITGVTVIAAGSFATYLYFKNIAIKVSSPLNSGQIVPESAIMAAFFHPNQKAITKLQQFGTPEAKKLISQNYAE
FQQENLAEANINWEKDIQSWLGGVMLAFVPGEEGQDMDPVNLLMVVGIKNKLEALRFVSKFKGEGENRVIKRKYQGVTIR
EITDESRKTFNVAILGDYLAIAPIPAVVESAIDTFQGKSVSLSQNAPETLQQNTELENTIATIFIPNYIQLITQFTDDLP
EDQSSSSTGLEQFQQINSVVMGIGVDDAGVRLRAVTKLVSPLPLELTKPASEKILQRFPAETMISLSGIGVSQSWSQLVT
QAQENQDLQDALGIVRNSFKEVGFDVDREVFSWMDGEFALGLIASNKGILATTGVGAAMVFETSDRSTAEATLKKLNQMA
SQKKGVVVEEKQIGDQLVTELQMLGIGTFLGYGWLDNNTLFVAMGKPLIEVMMSMPENSLIGSESFEEIRRSLPKSNQGY
FYWDIKQSMVWVKRYPFVSVLIPSEVRAILNSIRGIGVTASWLDELTNEMEMLLAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59231; Mature: 59231

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKFLITGVTVIAAGSFATYLYFKNIAIKVSSPLNSGQIVPESAIMAAFFHPNQKAIT
CCCHHHHHHHHHHHHCCHHHHHHEEEEEEEEEECCCCCCCCCCHHHHEEEEECCCHHHHH
KLQQFGTPEAKKLISQNYAEFQQENLAEANINWEKDIQSWLGGVMLAFVPGEEGQDMDPV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCHH
NLLMVVGIKNKLEALRFVSKFKGEGENRVIKRKYQGVTIREITDESRKTFNVAILGDYLA
HEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEHHCCCCCCEEEEEEEECHHH
IAPIPAVVESAIDTFQGKSVSLSQNAPETLQQNTELENTIATIFIPNYIQLITQFTDDLP
HCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHCCCHHHHEEEEEHHHHHHHHHHHHHCCC
EDQSSSSTGLEQFQQINSVVMGIGVDDAGVRLRAVTKLVSPLPLELTKPASEKILQRFPA
CCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCH
ETMISLSGIGVSQSWSQLVTQAQENQDLQDALGIVRNSFKEVGFDVDREVFSWMDGEFAL
HHEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEE
GLIASNKGILATTGVGAAMVFETSDRSTAEATLKKLNQMASQKKGVVVEEKQIGDQLVTE
EEEECCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LQMLGIGTFLGYGWLDNNTLFVAMGKPLIEVMMSMPENSLIGSESFEEIRRSLPKSNQGY
HHHHHHHHHHHCCEECCCEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCE
FYWDIKQSMVWVKRYPFVSVLIPSEVRAILNSIRGIGVTASWLDELTNEMEMLLAL
EEEEHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLKFLITGVTVIAAGSFATYLYFKNIAIKVSSPLNSGQIVPESAIMAAFFHPNQKAIT
CCCHHHHHHHHHHHHCCHHHHHHEEEEEEEEEECCCCCCCCCCHHHHEEEEECCCHHHHH
KLQQFGTPEAKKLISQNYAEFQQENLAEANINWEKDIQSWLGGVMLAFVPGEEGQDMDPV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCHH
NLLMVVGIKNKLEALRFVSKFKGEGENRVIKRKYQGVTIREITDESRKTFNVAILGDYLA
HEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEHHCCCCCCEEEEEEEECHHH
IAPIPAVVESAIDTFQGKSVSLSQNAPETLQQNTELENTIATIFIPNYIQLITQFTDDLP
HCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHCCCHHHHEEEEEHHHHHHHHHHHHHCCC
EDQSSSSTGLEQFQQINSVVMGIGVDDAGVRLRAVTKLVSPLPLELTKPASEKILQRFPA
CCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCH
ETMISLSGIGVSQSWSQLVTQAQENQDLQDALGIVRNSFKEVGFDVDREVFSWMDGEFAL
HHEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEE
GLIASNKGILATTGVGAAMVFETSDRSTAEATLKKLNQMASQKKGVVVEEKQIGDQLVTE
EEEECCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LQMLGIGTFLGYGWLDNNTLFVAMGKPLIEVMMSMPENSLIGSESFEEIRRSLPKSNQGY
HHHHHHHHHHHCCEECCCEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCE
FYWDIKQSMVWVKRYPFVSVLIPSEVRAILNSIRGIGVTASWLDELTNEMEMLLAL
EEEEHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA