| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474168
Identifier: 113474168
GI number: 113474168
Start: 423919
End: 424896
Strand: Direct
Name: 113474168
Synonym: Tery_0274
Alternate gene names: NA
Gene position: 423919-424896 (Clockwise)
Preceding gene: 113474167
Following gene: 113474176
Centisome position: 5.47
GC content: 32.41
Gene sequence:
>978_bases ATGTCTATCAATTTATCTCAAACTTCTGAACCAAAAATGAACTGTATACCCCGTTCATTTGATGTAAATGCAATAGAAAA TTTTTATACTACCACTTTTATTACGAAGAGTGGAATAGAAAATGTATTTAATCATTTTGTACCTAGGGATAGTGATATTT ATGTAACAACCTATCCAAAGTCTGGTACAACTTGGACTATGTCAATACTTGAACATTTAGTAAAAAAAGTTAGTGAAAAA GGTATTTCACTAGGTTTTAGTACAGAACATTTTTGTCCTTGGTTAGATAGGGCTGCAAGTACAGAAAACTGGCGTTTAAT ATTTTCAAAATTTGAAAAAGCTACATCTCCACGATTTTTTAAATCCCACGCTAGTGTAGGTTTAATCAAACAACCAGCAA GAATAATTCAATGTTTAAGACATCCTCTAGATACATTTGTTTCTGCATGGCATCATGTTAGGGGAAAAGAAGAAGTTTTT AACTATAACGGATCTTGGCATCATTTCTTTTCCAAAATAGCACTAAAAGGAAAATTTGAGAGCAGTGACTGGTTTGACTA TCATGAAGAATTTCTGAAAGCTTCTGAAGAAGGAAAAATTGAGGTATTATTTTTAAGGTATGAAGAAATGAAAAAAGATA ATGCTATTTCAGCTATACATAAACTTGCTGAATTTATTGGGGTTGAATCATATGATGCTGAAGAAATATCAAGAGCCACA AATTTTACAAAGATGAAAGAAAAATCCAATCAGGGACATATAGAGCCAGATGGAAGCTTATCTGATATGTTGGTTTCTCA AGAAGTTGGTGATAAAAATACCCCATCTAAAGCCCATATACGCAAAGGAATTGTAGGAGATTGGAAAAATTACTTGAGCG ATAGTGAACTCAACTTGTGGCAGAATTATGTACATATCAAAAAAGAAACCTGTCCCCGTGTGATAGATTTCTTTTCATTA GAGGGTTTACTTTGTTAA
Upstream 100 bases:
>100_bases GTAAGTTATGATATAGTTTAAATGCTAAACAGCTAAGTTGAGGATTAAGATTATTATCTAAAACTGAAGATGTCAACAAA TTCACTTATCCTGATACACT
Downstream 100 bases:
>100_bases TTTTCTAGAATTTTTGCTGCTAGCAATTATTTAATAAGGGAATTTAATTAGGGAATAGGGAATAAGTAATTGAGTAGAAT AATTAGTTGCTTACTTACTA
Product: sulfotransferase
Products: adenosine 3',5'-bisphosphate; alkyl sulfate
Alternate protein names: Alcohol Sulfotransferase
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSINLSQTSEPKMNCIPRSFDVNAIENFYTTTFITKSGIENVFNHFVPRDSDIYVTTYPKSGTTWTMSILEHLVKKVSEK GISLGFSTEHFCPWLDRAASTENWRLIFSKFEKATSPRFFKSHASVGLIKQPARIIQCLRHPLDTFVSAWHHVRGKEEVF NYNGSWHHFFSKIALKGKFESSDWFDYHEEFLKASEEGKIEVLFLRYEEMKKDNAISAIHKLAEFIGVESYDAEEISRAT NFTKMKEKSNQGHIEPDGSLSDMLVSQEVGDKNTPSKAHIRKGIVGDWKNYLSDSELNLWQNYVHIKKETCPRVIDFFSL EGLLC
Sequences:
>Translated_325_residues MSINLSQTSEPKMNCIPRSFDVNAIENFYTTTFITKSGIENVFNHFVPRDSDIYVTTYPKSGTTWTMSILEHLVKKVSEK GISLGFSTEHFCPWLDRAASTENWRLIFSKFEKATSPRFFKSHASVGLIKQPARIIQCLRHPLDTFVSAWHHVRGKEEVF NYNGSWHHFFSKIALKGKFESSDWFDYHEEFLKASEEGKIEVLFLRYEEMKKDNAISAIHKLAEFIGVESYDAEEISRAT NFTKMKEKSNQGHIEPDGSLSDMLVSQEVGDKNTPSKAHIRKGIVGDWKNYLSDSELNLWQNYVHIKKETCPRVIDFFSL EGLLC >Mature_324_residues SINLSQTSEPKMNCIPRSFDVNAIENFYTTTFITKSGIENVFNHFVPRDSDIYVTTYPKSGTTWTMSILEHLVKKVSEKG ISLGFSTEHFCPWLDRAASTENWRLIFSKFEKATSPRFFKSHASVGLIKQPARIIQCLRHPLDTFVSAWHHVRGKEEVFN YNGSWHHFFSKIALKGKFESSDWFDYHEEFLKASEEGKIEVLFLRYEEMKKDNAISAIHKLAEFIGVESYDAEEISRATN FTKMKEKSNQGHIEPDGSLSDMLVSQEVGDKNTPSKAHIRKGIVGDWKNYLSDSELNLWQNYVHIKKETCPRVIDFFSLE GLLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI29540545, Length=282, Percent_Identity=27.3049645390071, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI28830308, Length=258, Percent_Identity=29.8449612403101, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI31563388, Length=255, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI29550928, Length=259, Percent_Identity=28.957528957529, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI31563386, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4507305, Length=274, Percent_Identity=26.6423357664234, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI29550921, Length=260, Percent_Identity=27.3076923076923, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI10835035, Length=260, Percent_Identity=27.3076923076923, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI62868225, Length=260, Percent_Identity=27.3076923076923, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI62868223, Length=260, Percent_Identity=27.3076923076923, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI74024919, Length=261, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI56847626, Length=304, Percent_Identity=27.9605263157895, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI29550893, Length=259, Percent_Identity=25.8687258687259, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI4507303, Length=259, Percent_Identity=25.8687258687259, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI29540539, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI29540537, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI29540535, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI29540531, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI29029530, Length=281, Percent_Identity=24.5551601423488, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7657633, Length=289, Percent_Identity=24.2214532871972, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI4885617, Length=261, Percent_Identity=27.2030651340996, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17566452, Length=257, Percent_Identity=29.5719844357977, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI221468280, Length=301, Percent_Identity=25.9136212624585, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI22026942, Length=301, Percent_Identity=25.9136212624585, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24645281, Length=262, Percent_Identity=25.1908396946565, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.8.2.2
Molecular weight: Translated: 37502; Mature: 37371
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINLSQTSEPKMNCIPRSFDVNAIENFYTTTFITKSGIENVFNHFVPRDSDIYVTTYPK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC SGTTWTMSILEHLVKKVSEKGISLGFSTEHFCPWLDRAASTENWRLIFSKFEKATSPRFF CCCEEHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHCCCHHH KSHASVGLIKQPARIIQCLRHPLDTFVSAWHHVRGKEEVFNYNGSWHHFFSKIALKGKFE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCC SSDWFDYHEEFLKASEEGKIEVLFLRYEEMKKDNAISAIHKLAEFIGVESYDAEEISRAT CCCHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH NFTKMKEKSNQGHIEPDGSLSDMLVSQEVGDKNTPSKAHIRKGIVGDWKNYLSDSELNLW HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHH QNYVHIKKETCPRVIDFFSLEGLLC HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SINLSQTSEPKMNCIPRSFDVNAIENFYTTTFITKSGIENVFNHFVPRDSDIYVTTYPK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC SGTTWTMSILEHLVKKVSEKGISLGFSTEHFCPWLDRAASTENWRLIFSKFEKATSPRFF CCCEEHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHCCCHHH KSHASVGLIKQPARIIQCLRHPLDTFVSAWHHVRGKEEVFNYNGSWHHFFSKIALKGKFE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCC SSDWFDYHEEFLKASEEGKIEVLFLRYEEMKKDNAISAIHKLAEFIGVESYDAEEISRAT CCCHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH NFTKMKEKSNQGHIEPDGSLSDMLVSQEVGDKNTPSKAHIRKGIVGDWKNYLSDSELNLW HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHH QNYVHIKKETCPRVIDFFSLEGLLC HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3'-phosphoadenylyl sulfate; alcohol
Specific reaction: 3'-phosphoadenylyl sulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA