Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474133

Identifier: 113474133

GI number: 113474133

Start: 362733

End: 362966

Strand: Direct

Name: 113474133

Synonym: Tery_0233

Alternate gene names: NA

Gene position: 362733-362966 (Clockwise)

Preceding gene: 113474132

Following gene: 113474138

Centisome position: 4.68

GC content: 28.63

Gene sequence:

>234_bases
TTGAACTGTCTTTGTAATCTCATTAAGGTAGGAAAAAATGGTAAAAAAACATCATTAGAGGTAAATAATTTAGACCATTT
AAGATTAGTAGAAAGAATCCTTTATAAAATAGGCATAGGAAAGAAGATAAATGAGTTAATTGGAGAATCAACAAATGAAA
AAGTAACAGCAGTTCAGGTATTTAAAGAAATGCTCTTGAATGGGTTAGGTAAGGTTTTATCTCCACTATATTGA

Upstream 100 bases:

>100_bases
GATGACTTAGATAAACTTTAAAACCTACATTTAGAGCTACAAAACTTAGTATTGAACAACGATAAAATTTGAGTAACAAT
TTAGATTAATTAAAAAAAAC

Downstream 100 bases:

>100_bases
TTTAACAGATTTTTTCCTGGGAATTACCATAGGAAATTTAATTAGACCAGGAGTAAAAGTAGAGTATTTTAATGATGATA
AATTGGGAAGAGTATTAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MNCLCNLIKVGKNGKKTSLEVNNLDHLRLVERILYKIGIGKKINELIGESTNEKVTAVQVFKEMLLNGLGKVLSPLY

Sequences:

>Translated_77_residues
MNCLCNLIKVGKNGKKTSLEVNNLDHLRLVERILYKIGIGKKINELIGESTNEKVTAVQVFKEMLLNGLGKVLSPLY
>Mature_77_residues
MNCLCNLIKVGKNGKKTSLEVNNLDHLRLVERILYKIGIGKKINELIGESTNEKVTAVQVFKEMLLNGLGKVLSPLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8598; Mature: 8598

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCLCNLIKVGKNGKKTSLEVNNLDHLRLVERILYKIGIGKKINELIGESTNEKVTAVQV
CCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH
FKEMLLNGLGKVLSPLY
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNCLCNLIKVGKNGKKTSLEVNNLDHLRLVERILYKIGIGKKINELIGESTNEKVTAVQV
CCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH
FKEMLLNGLGKVLSPLY
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA