| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is galK [C]
Identifier: 113474115
GI number: 113474115
Start: 325107
End: 326174
Strand: Direct
Name: galK [C]
Synonym: Tery_0214
Alternate gene names: 113474115
Gene position: 325107-326174 (Clockwise)
Preceding gene: 113474114
Following gene: 113474118
Centisome position: 4.19
GC content: 33.52
Gene sequence:
>1068_bases ATGAAACTTTTTGTACCAGGTCGCCTTTGTTTATTTGGAGAACATAGTGATTGGGCAGGAGGGTATCGTTCTATGAACCC CCAAATAGATAAAGGCTATACAATTGTAGTAGGAGTTGATCAAGGAATTTATGCAGATGTCAAACCCCATCCTACTCATT TAATTATCAAGACAACTTTGAATAATGAAAGTCTGATACAGTCGTTTAATTTGCATAAGCATAAAGAAATATTATTAGCA GAAGCTCGTCGGGGAGGAGTTTTTAGTTATGTAGCTGGGGTTGTATATCAAGTTATTAATAATTATTCAGTAGGTGGTTT AGAAATAGATAATTATTTCACAGATTTACCAATTAAAAAGGGTCTATCATCAAGCGCGGCTATTTGTGTATTGGTGGCTA GAGCTTTTAACCTATTGTATGATTTAAAACTAAATATTCGTTCGGAAATGGAGTTAGCTTATCAGGGGGAAGTTACTACT CCTTCTCGTTGTGGCAAGATGGACCAAGCTTGTGCTTATGGTAAGCAAGCAATTATGATGATATTTGACGGGGAAAAAAC GGATATTATTGAACTTAATCCACCAAAAAAAGATTTATTCTTTGTTATTGTTGATCTAGGCGCGAGCAAAGATACTCAAG AGATATTGACTAGATTAAATAAATGTTATATAGAAGAAGCTAATAAAGTAAATGAGAATGTACAATATTATCTTGGAGTT ATTAATGCTGATATTACTAAACAAGCAGCATTAGCCTGGCAAAAAGGGGATGGAGAAAAAATTGGTAGTTTGATGCTCAA AGCACAAATTGAATTTGATAAATATATGATACCAGCTTGTCCTTCACAATTAACATCTCCAGTACTCCATTTATTACTAA ATTATTCACGTCTCCAAGAATATATTTGGGGTGGTAAAGGAGTTGGTTCTCAAGGTGATGGAACAGCTCAATTCATTGCT AAAGATGAGAATAGTCAACAGAAGTTAATTGAAATAATTAACCTAGATTTTCCTAAAATGCAATGTTTTAAATTAGTAGT TAGGGCTGAATATAGCAATTCTAAATGA
Upstream 100 bases:
>100_bases TCAAAGAGCACAAAAAAAAGTTGTTGAGTATCAAAATAATTTAGATATAGCAAAGCAAAGGGCAGATAAAGCTTTTAATT AGGAGCCAGTAAACAAAAAC
Downstream 100 bases:
>100_bases TATTAGAGAAAGTCTCTATTAAAAAAAATATAGTTAAATTTTGTAAGATAAACAATTGAGTTTTTCCATGATACTTAATT TATATTCAAAATCATTTAGA
Product: GHMP kinase
Products: ADP; alpha-D-Galactose 1-phosphate; H+ [C]
Alternate protein names: Nucleotidyl Transferase Family Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKLFVPGRLCLFGEHSDWAGGYRSMNPQIDKGYTIVVGVDQGIYADVKPHPTHLIIKTTLNNESLIQSFNLHKHKEILLA EARRGGVFSYVAGVVYQVINNYSVGGLEIDNYFTDLPIKKGLSSSAAICVLVARAFNLLYDLKLNIRSEMELAYQGEVTT PSRCGKMDQACAYGKQAIMMIFDGEKTDIIELNPPKKDLFFVIVDLGASKDTQEILTRLNKCYIEEANKVNENVQYYLGV INADITKQAALAWQKGDGEKIGSLMLKAQIEFDKYMIPACPSQLTSPVLHLLLNYSRLQEYIWGGKGVGSQGDGTAQFIA KDENSQQKLIEIINLDFPKMQCFKLVVRAEYSNSK
Sequences:
>Translated_355_residues MKLFVPGRLCLFGEHSDWAGGYRSMNPQIDKGYTIVVGVDQGIYADVKPHPTHLIIKTTLNNESLIQSFNLHKHKEILLA EARRGGVFSYVAGVVYQVINNYSVGGLEIDNYFTDLPIKKGLSSSAAICVLVARAFNLLYDLKLNIRSEMELAYQGEVTT PSRCGKMDQACAYGKQAIMMIFDGEKTDIIELNPPKKDLFFVIVDLGASKDTQEILTRLNKCYIEEANKVNENVQYYLGV INADITKQAALAWQKGDGEKIGSLMLKAQIEFDKYMIPACPSQLTSPVLHLLLNYSRLQEYIWGGKGVGSQGDGTAQFIA KDENSQQKLIEIINLDFPKMQCFKLVVRAEYSNSK >Mature_355_residues MKLFVPGRLCLFGEHSDWAGGYRSMNPQIDKGYTIVVGVDQGIYADVKPHPTHLIIKTTLNNESLIQSFNLHKHKEILLA EARRGGVFSYVAGVVYQVINNYSVGGLEIDNYFTDLPIKKGLSSSAAICVLVARAFNLLYDLKLNIRSEMELAYQGEVTT PSRCGKMDQACAYGKQAIMMIFDGEKTDIIELNPPKKDLFFVIVDLGASKDTQEILTRLNKCYIEEANKVNENVQYYLGV INADITKQAALAWQKGDGEKIGSLMLKAQIEFDKYMIPACPSQLTSPVLHLLLNYSRLQEYIWGGKGVGSQGDGTAQFIA KDENSQQKLIEIINLDFPKMQCFKLVVRAEYSNSK
Specific function: Galactose metabolism; first step. [C]
COG id: COG0153
COG function: function code G; Galactokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.6 [C]
Molecular weight: Translated: 39672; Mature: 39672
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFVPGRLCLFGEHSDWAGGYRSMNPQIDKGYTIVVGVDQGIYADVKPHPTHLIIKTTL CEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEEC NNESLIQSFNLHKHKEILLAEARRGGVFSYVAGVVYQVINNYSVGGLEIDNYFTDLPIKK CCHHHHHHCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCEEECCCHHC GLSSSAAICVLVARAFNLLYDLKLNIRSEMELAYQGEVTTPSRCGKMDQACAYGKQAIMM CCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCHHHCCCHHHHHHCCCEEEEE IFDGEKTDIIELNPPKKDLFFVIVDLGASKDTQEILTRLNKCYIEEANKVNENVQYYLGV EECCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE INADITKQAALAWQKGDGEKIGSLMLKAQIEFDKYMIPACPSQLTSPVLHLLLNYSRLQE ECCCHHHHHHHEEECCCCHHHHHEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHH YIWGGKGVGSQGDGTAQFIAKDENSQQKLIEIINLDFPKMQCFKLVVRAEYSNSK HHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLFVPGRLCLFGEHSDWAGGYRSMNPQIDKGYTIVVGVDQGIYADVKPHPTHLIIKTTL CEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEEC NNESLIQSFNLHKHKEILLAEARRGGVFSYVAGVVYQVINNYSVGGLEIDNYFTDLPIKK CCHHHHHHCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCEEECCCHHC GLSSSAAICVLVARAFNLLYDLKLNIRSEMELAYQGEVTTPSRCGKMDQACAYGKQAIMM CCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCHHHCCCHHHHHHCCCEEEEE IFDGEKTDIIELNPPKKDLFFVIVDLGASKDTQEILTRLNKCYIEEANKVNENVQYYLGV EECCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE INADITKQAALAWQKGDGEKIGSLMLKAQIEFDKYMIPACPSQLTSPVLHLLLNYSRLQE ECCCHHHHHHHEEECCCCHHHHHEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHH YIWGGKGVGSQGDGTAQFIAKDENSQQKLIEIINLDFPKMQCFKLVVRAEYSNSK HHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-Galactose [C]
Specific reaction: ATP + D-Galactose <==> ADP + alpha-D-Galactose 1-phosphate + H+ [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA