Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474092

Identifier: 113474092

GI number: 113474092

Start: 284158

End: 284673

Strand: Direct

Name: 113474092

Synonym: Tery_0189

Alternate gene names: NA

Gene position: 284158-284673 (Clockwise)

Preceding gene: 113474091

Following gene: 113474094

Centisome position: 3.67

GC content: 31.78

Gene sequence:

>516_bases
ATGAGAAAACAGCACTCTACAATGAATATAAATAAATACAAAAAAACGATATTATTTTTAGGAGTATTGTTTTCATCAGC
AGGAATGCAGAAAATCACCCCAGTTTTATCCCAAAATTTACAATTGACACCTATATTTGAAGATGTTAACTTGTATCCAA
AGTCTACTCTAAACCGAATGATTATCAGAGGGTTAAGTGGAGGACCTATATCTGCAAAAGAAAAAACAGGTAGAGAAAAT
ACTGTAACAGGACCATGTGTAGGTTTTATTGATAGAGAACCAGATCATAGATTAGTTTTAAATGGCTTTTTTAAATCTCT
GAAACTTGAGGTTCAAAGTAGTGAAGATACAACTTTAGTTATTAGAGGTCCTGGAGGTAGTTGGTGTAATGATGACTTCG
AGGGAAAAAATCCAGGAATTACAGGTCAATGGTTTTCAGGTACTTATGACATTTGGATAGGTTCTTACCAAAGAAATAAA
TACTATCCTTATGTAATTAAAATTACTAAAGAATAA

Upstream 100 bases:

>100_bases
TTGATGTACTAAAAAAAAGAAAGGGAAAATTAAAAATATTCAAGTGAAACAGCAAAATATGTGATTTATATTTTCCCCTA
TAACTTTTTTAACATTTTTT

Downstream 100 bases:

>100_bases
AGATAAGTAATAATCTTAAGTTAATTTAATTAAGTTTTTTTGTATGAATTATAAGTATTTATAGAAAATTTATTTGTATA
TATCGTACCATTCTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRKQHSTMNINKYKKTILFLGVLFSSAGMQKITPVLSQNLQLTPIFEDVNLYPKSTLNRMIIRGLSGGPISAKEKTGREN
TVTGPCVGFIDREPDHRLVLNGFFKSLKLEVQSSEDTTLVIRGPGGSWCNDDFEGKNPGITGQWFSGTYDIWIGSYQRNK
YYPYVIKITKE

Sequences:

>Translated_171_residues
MRKQHSTMNINKYKKTILFLGVLFSSAGMQKITPVLSQNLQLTPIFEDVNLYPKSTLNRMIIRGLSGGPISAKEKTGREN
TVTGPCVGFIDREPDHRLVLNGFFKSLKLEVQSSEDTTLVIRGPGGSWCNDDFEGKNPGITGQWFSGTYDIWIGSYQRNK
YYPYVIKITKE
>Mature_171_residues
MRKQHSTMNINKYKKTILFLGVLFSSAGMQKITPVLSQNLQLTPIFEDVNLYPKSTLNRMIIRGLSGGPISAKEKTGREN
TVTGPCVGFIDREPDHRLVLNGFFKSLKLEVQSSEDTTLVIRGPGGSWCNDDFEGKNPGITGQWFSGTYDIWIGSYQRNK
YYPYVIKITKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19315; Mature: 19315

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQHSTMNINKYKKTILFLGVLFSSAGMQKITPVLSQNLQLTPIFEDVNLYPKSTLNRM
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
IIRGLSGGPISAKEKTGRENTVTGPCVGFIDREPDHRLVLNGFFKSLKLEVQSSEDTTLV
HHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHEEEEEEECCCCCEEE
IRGPGGSWCNDDFEGKNPGITGQWFSGTYDIWIGSYQRNKYYPYVIKITKE
EECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MRKQHSTMNINKYKKTILFLGVLFSSAGMQKITPVLSQNLQLTPIFEDVNLYPKSTLNRM
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
IIRGLSGGPISAKEKTGRENTVTGPCVGFIDREPDHRLVLNGFFKSLKLEVQSSEDTTLV
HHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHEEEEEEECCCCCEEE
IRGPGGSWCNDDFEGKNPGITGQWFSGTYDIWIGSYQRNKYYPYVIKITKE
EECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA