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The map label for this gene is yedU [C]

Identifier: 110835500

GI number: 110835500

Start: 2985025

End: 2985699

Strand: Reverse

Name: yedU [C]

Synonym: ABO_2639

Alternate gene names: 110835500

Gene position: 2985699-2985025 (Counterclockwise)

Preceding gene: 110835502

Following gene: 110835499

Centisome position: 95.69

GC content: 57.04

Gene sequence:

>675_bases
ATGAATTTGGACAAACCGTTATTAATGCTCGTTACCAGCGCATCAGAGATGGGCGAAAATCAGCCGACGGGCCTGTGGCT
GGAAGAATTCGCAGTGCCTTATTTGTTATTCAAAGAAAACAAAATCCCGGTGGTGGTGGCCAGCCCGAAAGGCGGGAGAA
TTCCTGTGGACCCGAACTCAGCCCCCGATGATAGTAAGAAGGAAGCGTGGGCTGAGGCGGTGGATGTTTTGCAAAACACC
CGTGAACTGGAGATGGTGTGGGAAGACCATTTTGCCGGTGTCTTTGTGCCTGGCGGACACGGCGCCATGTTCGATATGCC
GGATAACCCCTTGGTTGCGGCCGTCATGGAGCGCACTTGGGCTCAGGGCGGTTTGCTGGGCGCGGTTTGCCACGGCCCGG
CCGCGTTGGTGGGGCTGCGCGACGAGCAGGGCGCCCCTCTGGTGCAGAATAAAACGGTGGCCTGTTTCACGAACAGTGAA
GAGCGGGAGGTGGGCCTCGATGAGGTAATGCCGTTTCTGTTGGCGTCTCGCCTTGAAGACCTGGGCGCCCAGTTGGATTT
GGCGGATGATTTTGCTGCCCATGCGGTTACCGATGGCAAACTGGTCACCGGTCAGAATCCGCAGTCCAGCCATGTGGTGG
CGGAGGCGGTGATTAACCAATTGTACAGCGAATAA

Upstream 100 bases:

>100_bases
GTAAAAGCCCACGGTTACTTCACAGCATGTTGCCACGGTCGGTGTTGTTATGCACAACACGGTGTACGCAAGCCGAGAGT
GGCCACCGACAGGAGGACGC

Downstream 100 bases:

>100_bases
CCCATGGGTGGCGCACAATCCAGCGATTGTGGCCTCGCAGCCGATAGTGGCTTGCAGTATTGTTAGGCGCAACTTGCCTG
CTATCGGCTTTTCTATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Chaperone HchA; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein HchA; Fis Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNLDKPLLMLVTSASEMGENQPTGLWLEEFAVPYLLFKENKIPVVVASPKGGRIPVDPNSAPDDSKKEAWAEAVDVLQNT
RELEMVWEDHFAGVFVPGGHGAMFDMPDNPLVAAVMERTWAQGGLLGAVCHGPAALVGLRDEQGAPLVQNKTVACFTNSE
EREVGLDEVMPFLLASRLEDLGAQLDLADDFAAHAVTDGKLVTGQNPQSSHVVAEAVINQLYSE

Sequences:

>Translated_224_residues
MNLDKPLLMLVTSASEMGENQPTGLWLEEFAVPYLLFKENKIPVVVASPKGGRIPVDPNSAPDDSKKEAWAEAVDVLQNT
RELEMVWEDHFAGVFVPGGHGAMFDMPDNPLVAAVMERTWAQGGLLGAVCHGPAALVGLRDEQGAPLVQNKTVACFTNSE
EREVGLDEVMPFLLASRLEDLGAQLDLADDFAAHAVTDGKLVTGQNPQSSHVVAEAVINQLYSE
>Mature_224_residues
MNLDKPLLMLVTSASEMGENQPTGLWLEEFAVPYLLFKENKIPVVVASPKGGRIPVDPNSAPDDSKKEAWAEAVDVLQNT
RELEMVWEDHFAGVFVPGGHGAMFDMPDNPLVAAVMERTWAQGGLLGAVCHGPAALVGLRDEQGAPLVQNKTVACFTNSE
EREVGLDEVMPFLLASRLEDLGAQLDLADDFAAHAVTDGKLVTGQNPQSSHVVAEAVINQLYSE

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788278, Length=135, Percent_Identity=25.9259259259259, Blast_Score=63, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320742, Length=239, Percent_Identity=27.6150627615063, Blast_Score=93, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6324975, Length=241, Percent_Identity=26.9709543568465, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6324967, Length=241, Percent_Identity=26.9709543568465, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6323984, Length=241, Percent_Identity=26.9709543568465, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24133; Mature: 24133

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDKPLLMLVTSASEMGENQPTGLWLEEFAVPYLLFKENKIPVVVASPKGGRIPVDPNS
CCCCCCHHHEEECHHHHCCCCCCCEEHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCC
APDDSKKEAWAEAVDVLQNTRELEMVWEDHFAGVFVPGGHGAMFDMPDNPLVAAVMERTW
CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHH
AQGGLLGAVCHGPAALVGLRDEQGAPLVQNKTVACFTNSEEREVGLDEVMPFLLASRLED
HCCCCEEEECCCCEEEEEECCCCCCCEECCCEEEEEECCCHHHCCHHHHHHHHHHHHHHH
LGAQLDLADDFAAHAVTDGKLVTGQNPQSSHVVAEAVINQLYSE
HCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLDKPLLMLVTSASEMGENQPTGLWLEEFAVPYLLFKENKIPVVVASPKGGRIPVDPNS
CCCCCCHHHEEECHHHHCCCCCCCEEHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCC
APDDSKKEAWAEAVDVLQNTRELEMVWEDHFAGVFVPGGHGAMFDMPDNPLVAAVMERTW
CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHH
AQGGLLGAVCHGPAALVGLRDEQGAPLVQNKTVACFTNSEEREVGLDEVMPFLLASRLED
HCCCCEEEECCCCEEEEEECCCCCCCEECCCEEEEEECCCHHHCCHHHHHHHHHHHHHHH
LGAQLDLADDFAAHAVTDGKLVTGQNPQSSHVVAEAVINQLYSE
HCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA