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The map label for this gene is ydiK [C]

Identifier: 110835489

GI number: 110835489

Start: 2973948

End: 2975069

Strand: Reverse

Name: ydiK [C]

Synonym: ABO_2628

Alternate gene names: 110835489

Gene position: 2975069-2973948 (Counterclockwise)

Preceding gene: 110835490

Following gene: 110835488

Centisome position: 95.35

GC content: 53.92

Gene sequence:

>1122_bases
ATGCGGGACTCGGGAATATTGGAAAAACTGGAACAGCGTGCTTTTCTGTTTTCCCTAGTGGCGGTGAGCGCCGTGTTTGC
CTTGCTGATTCAGCCTTTCTTTGCGCCTATCTTTTGGGCCTGCGCAATTAGTGTGATTTTCTATCCTTTGCATAAACGCT
TGCTGGCTCGCTGGCCGACACGACGTAATTTGGTGGCGCTGTTTACCCTGATGCTGTGTGTAGTGCTGGTGGTGATTCCT
GTGCTGGCGGTGGCGACCTCATTCGTCACCGAAGGGGTCGGGTTGTTTCAGAAGGTGCAAAGCGGTGAGATTGATCTGGC
CAGCTATGTGGACAAGGTCAAACACGCTTTTCCGGGAGTGCAATCTCTGGCAGAGCGTTTTGATGTGGACCTTGAAAAAA
TCAAAGAACAGGCGGTCAAGGCGTTTACCGGCGCCGGTCAGTTCCTCGCTAAACGGGCATTGGCGGTAGGGCAGAATACC
TTTCAATTCTTCCTCAACTTGGGCTTGATGCTCTATCTGGCGTTTTTCCTGATCCGCGATGGTGACTCCATGGTGGCTAT
GCTGATTAGGGCTCTGCCTCTAGGCGATGAGCGTGAAGAGTTACTGTTTGCTAAGTTTGCGGAAGTGACCCGTGCCACCA
TTAAGGGAAACCTGCTGGTGGCGATTACGCAGGGTGCTTTGGGCGGGCTGATTTTTTGGTGGCTGGGCATTCCTGGCGCT
TTACTGTGGGGGGTAGTGATGGCGGTACTGTCACTCATTCCTGCGGTGGGTGCAGGGCTGATCTGGTTCCCGGTGGCGTT
GTATCTGTATGCCGTGGGCGACATGAAGGAGGCCACCGTCCTGATTTTGTTCGGGGTGTTTGTGATCGGCCTGGTGGACA
ATATTCTGCGCCCGATTCTGGTGGGCCGTGATACCAAGTTGCCGGACTATGTGGTGCTATTTTCCACCCTGGGTGGTTTG
GCCATGTTTGGTATCACTGGGTTTGCCGTTGGTCCTCTGCTAGCGGCTCTTTTTGTCGCGTTTTGGGGTATCTTTATCCG
TGAATTTAACGAGGAGGATGTGCCTGGGTTGCCGGTCCAAAGCGCGCAGGCTGAATCCTCCTCCGGGAGTGAACAGCGAT
GA

Upstream 100 bases:

>100_bases
ATCTGGGGTCTACCATGCTGGGGGGCGGTTGACCTCGCTTGGGCTCGGACGGACGGCTTCGGTTTTATCCGAATGACGAG
AGATAAGGAGGCGGCAGGGT

Downstream 100 bases:

>100_bases
TTTTTCTGCGATTGGTGATGGCGGCGTCCGTTGTCGGTTTGTCTGCATTCGGTTGTGATGAAGACGATGATCTATTCTCC
GACAGTACTCGGCTGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRDSGILEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPLHKRLLARWPTRRNLVALFTLMLCVVLVVIP
VLAVATSFVTEGVGLFQKVQSGEIDLASYVDKVKHAFPGVQSLAERFDVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNT
FQFFLNLGLMLYLAFFLIRDGDSMVAMLIRALPLGDEREELLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLGIPGA
LLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATVLILFGVFVIGLVDNILRPILVGRDTKLPDYVVLFSTLGGL
AMFGITGFAVGPLLAALFVAFWGIFIREFNEEDVPGLPVQSAQAESSSGSEQR

Sequences:

>Translated_373_residues
MRDSGILEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPLHKRLLARWPTRRNLVALFTLMLCVVLVVIP
VLAVATSFVTEGVGLFQKVQSGEIDLASYVDKVKHAFPGVQSLAERFDVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNT
FQFFLNLGLMLYLAFFLIRDGDSMVAMLIRALPLGDEREELLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLGIPGA
LLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATVLILFGVFVIGLVDNILRPILVGRDTKLPDYVVLFSTLGGL
AMFGITGFAVGPLLAALFVAFWGIFIREFNEEDVPGLPVQSAQAESSSGSEQR
>Mature_373_residues
MRDSGILEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPLHKRLLARWPTRRNLVALFTLMLCVVLVVIP
VLAVATSFVTEGVGLFQKVQSGEIDLASYVDKVKHAFPGVQSLAERFDVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNT
FQFFLNLGLMLYLAFFLIRDGDSMVAMLIRALPLGDEREELLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLGIPGA
LLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATVLILFGVFVIGLVDNILRPILVGRDTKLPDYVVLFSTLGGL
AMFGITGFAVGPLLAALFVAFWGIFIREFNEEDVPGLPVQSAQAESSSGSEQR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=335, Percent_Identity=27.1641791044776, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40741; Mature: 40741

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]