Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835486

Identifier: 110835486

GI number: 110835486

Start: 2971107

End: 2972201

Strand: Reverse

Name: 110835486

Synonym: ABO_2625

Alternate gene names: NA

Gene position: 2972201-2971107 (Counterclockwise)

Preceding gene: 110835487

Following gene: 110835485

Centisome position: 95.26

GC content: 59.0

Gene sequence:

>1095_bases
ATGCGGAGATATTGGGTGGTTTCTATTCATACCTCAGCCCCTGCGTTGTCTCTTCGCGCGGGGAGCGCTGCCATTGCGCA
TTTGCGCGAACATGGACTGCGGGCCGCCGATGTGGATATCGTTCCCGGCGCTGCCGGCGGGCCAAAAGCGTTAGGCATCA
ACGGCCTAGACCAAGCGGTGTTCGGGGATTTTTTGCCCACCGCGCCGCGCCCGCGGACCTTGATTGGCGCGTCTATCGGC
AGCTGGCGGTTTGCGGCCATTACCATGGGCGATGCCCGCGAAGGCCTGGCCCGTTTGGCTGCGCTCTATACTCAGCAGCG
TTTTCCTAAAGGCATCACCGCCAAAGAGATAAGCCTGCGCTGCGCGCAGATGTTGTCGGAACTGCTGCAGGATCGGGATC
AGCGGATTCTGCATAATCCGGATTACCGGCTGGTGATTGTGATGACCCGCAGCCGTGGGTTGATGGCCCGTCAGGGGGGG
CTAGGGTTGGGGCTAGGGCTGGCAGGCTTGATTGGCACCAATTTGTTTAGCCGCCGAGCTATCGGCTGGTTTATGGAGCG
TGCGCTGGTTTATCCGCAAGGGGATGCTTTGCCGTTGGGGGAGCTCAATGATTTCACCACCCACCATGTGAATCTGCGGG
CGGATAATGTGCGGGCGGCATTGTTGGCCAGTGCCGCGATTCCCATGGTGCTGGACGGCGTCACCGGCTTGCCCGGTGCT
CCAGATGGCGTGTATCGCGATGGCGGCCTGGTCGATTATCACCTAGACCTGCCTTATCAGAGCGAAGGTATTGTGTTGTT
CCCGCATTTCACTGATCGGGTAATCCCCGGTTGGTTTGATAAACCGTTGCGGTGGCGCAACGGCGACCCGCAACGCTTGC
GCAACCTGTTGCTAGTCACCCCGTCCCGCGACTATTTGGCACGCCTGCCCCACGGCAAGCTTCCCGATCGTACGGATTTC
AAACAGTATCGTGGTAATGACGCTGGTCGCGAGGCTTATTGGCGCAAGGCGGTGGCTGAAAGTCAGCATCTTGGCGATGA
GTTTCTGGAGTTGGTTGAAACCGGCAAACTAGTTGATCGTTTGCACCCTCTGTAA

Upstream 100 bases:

>100_bases
TCTTCAGCGGCAGGATTGCCGTACGGTTTTGCTCCAATAGTGGAATGCTATTTCGGCGCGTTTCTTTTTCTCGTTACCAT
AGTTACTCCTGCTGGAATAG

Downstream 100 bases:

>100_bases
GCGCAGCCACTGGGCAGGGTGGCGTTTGACGGACAGTTCCTCGTAGCCGTGTTAGGCTCGCTCTCCTGATTCAGCTAGAG
GGACCATGATGACATCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRRYWVVSIHTSAPALSLRAGSAAIAHLREHGLRAADVDIVPGAAGGPKALGINGLDQAVFGDFLPTAPRPRTLIGASIG
SWRFAAITMGDAREGLARLAALYTQQRFPKGITAKEISLRCAQMLSELLQDRDQRILHNPDYRLVIVMTRSRGLMARQGG
LGLGLGLAGLIGTNLFSRRAIGWFMERALVYPQGDALPLGELNDFTTHHVNLRADNVRAALLASAAIPMVLDGVTGLPGA
PDGVYRDGGLVDYHLDLPYQSEGIVLFPHFTDRVIPGWFDKPLRWRNGDPQRLRNLLLVTPSRDYLARLPHGKLPDRTDF
KQYRGNDAGREAYWRKAVAESQHLGDEFLELVETGKLVDRLHPL

Sequences:

>Translated_364_residues
MRRYWVVSIHTSAPALSLRAGSAAIAHLREHGLRAADVDIVPGAAGGPKALGINGLDQAVFGDFLPTAPRPRTLIGASIG
SWRFAAITMGDAREGLARLAALYTQQRFPKGITAKEISLRCAQMLSELLQDRDQRILHNPDYRLVIVMTRSRGLMARQGG
LGLGLGLAGLIGTNLFSRRAIGWFMERALVYPQGDALPLGELNDFTTHHVNLRADNVRAALLASAAIPMVLDGVTGLPGA
PDGVYRDGGLVDYHLDLPYQSEGIVLFPHFTDRVIPGWFDKPLRWRNGDPQRLRNLLLVTPSRDYLARLPHGKLPDRTDF
KQYRGNDAGREAYWRKAVAESQHLGDEFLELVETGKLVDRLHPL
>Mature_364_residues
MRRYWVVSIHTSAPALSLRAGSAAIAHLREHGLRAADVDIVPGAAGGPKALGINGLDQAVFGDFLPTAPRPRTLIGASIG
SWRFAAITMGDAREGLARLAALYTQQRFPKGITAKEISLRCAQMLSELLQDRDQRILHNPDYRLVIVMTRSRGLMARQGG
LGLGLGLAGLIGTNLFSRRAIGWFMERALVYPQGDALPLGELNDFTTHHVNLRADNVRAALLASAAIPMVLDGVTGLPGA
PDGVYRDGGLVDYHLDLPYQSEGIVLFPHFTDRVIPGWFDKPLRWRNGDPQRLRNLLLVTPSRDYLARLPHGKLPDRTDF
KQYRGNDAGREAYWRKAVAESQHLGDEFLELVETGKLVDRLHPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40080; Mature: 40080

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYWVVSIHTSAPALSLRAGSAAIAHLREHGLRAADVDIVPGAAGGPKALGINGLDQAV
CCEEEEEEEECCCCEEEECCCHHHHHHHHHCCCCEECEEEECCCCCCCCCCCCCCCHHHH
FGDFLPTAPRPRTLIGASIGSWRFAAITMGDAREGLARLAALYTQQRFPKGITAKEISLR
HHHHCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
CAQMLSELLQDRDQRILHNPDYRLVIVMTRSRGLMARQGGLGLGLGLAGLIGTNLFSRRA
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCEEHHHHHHHHHHHHHHHHH
IGWFMERALVYPQGDALPLGELNDFTTHHVNLRADNVRAALLASAAIPMVLDGVTGLPGA
HHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCC
PDGVYRDGGLVDYHLDLPYQSEGIVLFPHFTDRVIPGWFDKPLRWRNGDPQRLRNLLLVT
CCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEC
PSRDYLARLPHGKLPDRTDFKQYRGNDAGREAYWRKAVAESQHLGDEFLELVETGKLVDR
CCHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LHPL
HCCC
>Mature Secondary Structure
MRRYWVVSIHTSAPALSLRAGSAAIAHLREHGLRAADVDIVPGAAGGPKALGINGLDQAV
CCEEEEEEEECCCCEEEECCCHHHHHHHHHCCCCEECEEEECCCCCCCCCCCCCCCHHHH
FGDFLPTAPRPRTLIGASIGSWRFAAITMGDAREGLARLAALYTQQRFPKGITAKEISLR
HHHHCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
CAQMLSELLQDRDQRILHNPDYRLVIVMTRSRGLMARQGGLGLGLGLAGLIGTNLFSRRA
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCEEHHHHHHHHHHHHHHHHH
IGWFMERALVYPQGDALPLGELNDFTTHHVNLRADNVRAALLASAAIPMVLDGVTGLPGA
HHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCC
PDGVYRDGGLVDYHLDLPYQSEGIVLFPHFTDRVIPGWFDKPLRWRNGDPQRLRNLLLVT
CCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEC
PSRDYLARLPHGKLPDRTDFKQYRGNDAGREAYWRKAVAESQHLGDEFLELVETGKLVDR
CCHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LHPL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA