| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110835468
Identifier: 110835468
GI number: 110835468
Start: 2951167
End: 2951694
Strand: Reverse
Name: 110835468
Synonym: ABO_2607
Alternate gene names: NA
Gene position: 2951694-2951167 (Counterclockwise)
Preceding gene: 110835469
Following gene: 110835466
Centisome position: 94.6
GC content: 51.7
Gene sequence:
>528_bases ATGATGAACAGTAAATGGATGCTGGCCGCTGCGTCAGGTGCGGTTTTGTTGAGTCAAGCTGCGGTCGCAGACCTGAATGC CGGTGTTAATGCTGCTGTGAATGCTCAGGCAGACGCCAGTGCTGCTGAACAAGCTGTTCGTGATCAGCGTGATGCGGCCA AGGCAGACGCCAAGCAGATGGGCAAAGATGCAGGGGCGCAGCGTGATAAAGTGGAAGGCGATATCAAAGTTCGGCATGAA GACATGAAAGAAGACGCCAAGGCTAAGCGTGATGGCATGAAGAGTGACGCAAAAGCCATGGGCGATGATGCCCGTGCTAA GCACGAAGCTAACATGAAAAAAATGGAAGAAAATCGTGATGCTGCGCGCCAGCGTCAGGAAGATGCGCTGAATAACGCTC AGGGCGCAGGTGCCAATGCTAACGTCGAGATGAAAGCCGACGCGGCAGGTGTCAATGCTGAAGCGAAAGTCGATGCAAAA GTAGACGCTGAAAAAGAAGAAAAAGCGTGGTTTAATTTCTGGGATTAA
Upstream 100 bases:
>100_bases AGTAATTTTTTACGCTTTGTTACTTGAGCTCGTAGCGGCTTTGTAAGAATGTGGTTGCACGGTTCCCGACTAGGGGGTTT TTAGTTTTTACAAGGAGTCT
Downstream 100 bases:
>100_bases TATTTACAGCGCCAGACAAAAAAAGCCGCTATTTGCGGCTTTTTTTAGTCTCGCGCACTGAGTGTGCGGGGGCTGGCAGG AACGGAGTAGCGTTCTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MMNSKWMLAAASGAVLLSQAAVADLNAGVNAAVNAQADASAAEQAVRDQRDAAKADAKQMGKDAGAQRDKVEGDIKVRHE DMKEDAKAKRDGMKSDAKAMGDDARAKHEANMKKMEENRDAARQRQEDALNNAQGAGANANVEMKADAAGVNAEAKVDAK VDAEKEEKAWFNFWD
Sequences:
>Translated_175_residues MMNSKWMLAAASGAVLLSQAAVADLNAGVNAAVNAQADASAAEQAVRDQRDAAKADAKQMGKDAGAQRDKVEGDIKVRHE DMKEDAKAKRDGMKSDAKAMGDDARAKHEANMKKMEENRDAARQRQEDALNNAQGAGANANVEMKADAAGVNAEAKVDAK VDAEKEEKAWFNFWD >Mature_175_residues MMNSKWMLAAASGAVLLSQAAVADLNAGVNAAVNAQADASAAEQAVRDQRDAAKADAKQMGKDAGAQRDKVEGDIKVRHE DMKEDAKAKRDGMKSDAKAMGDDARAKHEANMKKMEENRDAARQRQEDALNNAQGAGANANVEMKADAAGVNAEAKVDAK VDAEKEEKAWFNFWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18704; Mature: 18704
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNSKWMLAAASGAVLLSQAAVADLNAGVNAAVNAQADASAAEQAVRDQRDAAKADAKQM CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH GKDAGAQRDKVEGDIKVRHEDMKEDAKAKRDGMKSDAKAMGDDARAKHEANMKKMEENRD HHHCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH AARQRQEDALNNAQGAGANANVEMKADAAGVNAEAKVDAKVDAEKEEKAWFNFWD HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCHHHCCCCCCC >Mature Secondary Structure MMNSKWMLAAASGAVLLSQAAVADLNAGVNAAVNAQADASAAEQAVRDQRDAAKADAKQM CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH GKDAGAQRDKVEGDIKVRHEDMKEDAKAKRDGMKSDAKAMGDDARAKHEANMKKMEENRD HHHCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH AARQRQEDALNNAQGAGANANVEMKADAAGVNAEAKVDAKVDAEKEEKAWFNFWD HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA