| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835351
Identifier: 110835351
GI number: 110835351
Start: 2823239
End: 2823763
Strand: Reverse
Name: 110835351
Synonym: ABO_2490
Alternate gene names: NA
Gene position: 2823763-2823239 (Counterclockwise)
Preceding gene: 110835353
Following gene: 110835350
Centisome position: 90.5
GC content: 55.05
Gene sequence:
>525_bases ATGTTCCTTGATGAAATGCCTGGCAAATTTCGCTACCCGCAGCCGGAAGATGCTGAAGATAAAACGCTGTTGGCCGATAT CCAGCGCAAGGGCTGGCACCACTTTGCCGTTTCCGGCGGTGATGGTCTGCCCGGTTATACGTTCAGCGTGGGGCACTTTC TCAATCTGAATCACCCGGAATTGATTGTGGTCGGCCTGAAAGACGCACTGGCCAGCAAATTGTTGGATAGCGCGGCGGTT CGTATTCGTGGGCTGAAAAAACCTTATCAGCCGTACCGCCTGTATAACGACATTGCCGATGGTCTTGAAGTGATGTTCTT GCCGGTGGCTTTTCCGCACTACAAGGAATATCTGGGTTTCGCTAACTGGTTCTACCAGAGCCTGCCGGCACCGTATCCGG CGTTGCAGATGGTCTGGCCAGATCCGAAAGGCGTGTTCCCTTGGCAGCCCGGTTATGATGCGCGTTTTCATCGTGCTCAG CCGTTGCTGGGTAAGGCTCCGGCCTCGCCGCTAGGCCAGCGTTAA
Upstream 100 bases:
>100_bases GGGTGGCACCAAGTCCATGCGGAGTCTGCTATCATTACGAACATACCGTGTTAATTGTTTGTTAGTGCCTTAAGGTGCTG CCTGAACCGATGATGACCCT
Downstream 100 bases:
>100_bases TAGTCTGTGGACGGCCCTTCCTGAGAGGGGGTATCTGTTTATGGAGAAAGAGAGAGCATCATGGCGAACTCACTGCAGAA GCAATTAATGAAAGCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MFLDEMPGKFRYPQPEDAEDKTLLADIQRKGWHHFAVSGGDGLPGYTFSVGHFLNLNHPELIVVGLKDALASKLLDSAAV RIRGLKKPYQPYRLYNDIADGLEVMFLPVAFPHYKEYLGFANWFYQSLPAPYPALQMVWPDPKGVFPWQPGYDARFHRAQ PLLGKAPASPLGQR
Sequences:
>Translated_174_residues MFLDEMPGKFRYPQPEDAEDKTLLADIQRKGWHHFAVSGGDGLPGYTFSVGHFLNLNHPELIVVGLKDALASKLLDSAAV RIRGLKKPYQPYRLYNDIADGLEVMFLPVAFPHYKEYLGFANWFYQSLPAPYPALQMVWPDPKGVFPWQPGYDARFHRAQ PLLGKAPASPLGQR >Mature_174_residues MFLDEMPGKFRYPQPEDAEDKTLLADIQRKGWHHFAVSGGDGLPGYTFSVGHFLNLNHPELIVVGLKDALASKLLDSAAV RIRGLKKPYQPYRLYNDIADGLEVMFLPVAFPHYKEYLGFANWFYQSLPAPYPALQMVWPDPKGVFPWQPGYDARFHRAQ PLLGKAPASPLGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19699; Mature: 19699
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLDEMPGKFRYPQPEDAEDKTLLADIQRKGWHHFAVSGGDGLPGYTFSVGHFLNLNHPE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEECCEEEECCCCC LIVVGLKDALASKLLDSAAVRIRGLKKPYQPYRLYNDIADGLEVMFLPVAFPHYKEYLGF EEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHCCCHHHHHHHHH ANWFYQSLPAPYPALQMVWPDPKGVFPWQPGYDARFHRAQPLLGKAPASPLGQR HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFLDEMPGKFRYPQPEDAEDKTLLADIQRKGWHHFAVSGGDGLPGYTFSVGHFLNLNHPE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEECCEEEECCCCC LIVVGLKDALASKLLDSAAVRIRGLKKPYQPYRLYNDIADGLEVMFLPVAFPHYKEYLGF EEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHCCCHHHHHHHHH ANWFYQSLPAPYPALQMVWPDPKGVFPWQPGYDARFHRAQPLLGKAPASPLGQR HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA