Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
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Accession | NC_008260 |
Length | 3,120,143 |
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The map label for this gene is yaiL [H]
Identifier: 110835350
GI number: 110835350
Start: 2822642
End: 2823178
Strand: Reverse
Name: yaiL [H]
Synonym: ABO_2489
Alternate gene names: 110835350
Gene position: 2823178-2822642 (Counterclockwise)
Preceding gene: 110835351
Following gene: 110835349
Centisome position: 90.48
GC content: 54.56
Gene sequence:
>537_bases ATGGCGAACTCACTGCAGAAGCAATTAATGAAAGCGGGGCTGGCGGACGAGAAAAAAGCCCGCAAGGCCAAGCAGCAGAA GCGCGAGGATGTAAACAAAGCCAAGCGCGGCGAAATCGAGATGGAAGATCCAGCAGATCGTGCCCGCCGCCTGCGCGAGG AAAAGGCCGAGGCAGACCGCCAGCGTGAGGCCCAGCGTAAGGCCGAGCGTGAAAAGAAAGAAATCGCCGCACAGATCAAG CAGATGATCGAGCAAAGTCGGCTAGAGCGAAATGGAGAGGTCGCCTTCCAGTTCGTGCAGGACAAGAAGATAAAAAAAGC CTACGTAACCGGTAACCAGCAGAAGCAATTGGAACGGGGGCAGATCGCCATTGTCGCCTTAGGTGAGAGCTTCGAGTTGG TGCCCACTGTGGTAGCGGAAAAGATTCGTCAACGGGACGAAGCTGCGGTGTTGTTGCTCAATGAGCGTGGCACTGAAACG GTGGACGAAGATGATCCCTATAAGGACTTTCCGATCCCTGACGATTTGATGTGGTAA
Upstream 100 bases:
>100_bases GCTGGGTAAGGCTCCGGCCTCGCCGCTAGGCCAGCGTTAATAGTCTGTGGACGGCCCTTCCTGAGAGGGGGTATCTGTTT ATGGAGAAAGAGAGAGCATC
Downstream 100 bases:
>100_bases GGCGTGCTGTACCTGCTACAAGCGACAGTCCAGGGTTCCGCAGATTCCTCCACTCACGTTTTCAACCAAGCAGGCCAGAG CCATGACCGTAACCCCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MANSLQKQLMKAGLADEKKARKAKQQKREDVNKAKRGEIEMEDPADRARRLREEKAEADRQREAQRKAEREKKEIAAQIK QMIEQSRLERNGEVAFQFVQDKKIKKAYVTGNQQKQLERGQIAIVALGESFELVPTVVAEKIRQRDEAAVLLLNERGTET VDEDDPYKDFPIPDDLMW
Sequences:
>Translated_178_residues MANSLQKQLMKAGLADEKKARKAKQQKREDVNKAKRGEIEMEDPADRARRLREEKAEADRQREAQRKAEREKKEIAAQIK QMIEQSRLERNGEVAFQFVQDKKIKKAYVTGNQQKQLERGQIAIVALGESFELVPTVVAEKIRQRDEAAVLLLNERGTET VDEDDPYKDFPIPDDLMW >Mature_177_residues ANSLQKQLMKAGLADEKKARKAKQQKREDVNKAKRGEIEMEDPADRARRLREEKAEADRQREAQRKAEREKKEIAAQIKQ MIEQSRLERNGEVAFQFVQDKKIKKAYVTGNQQKQLERGQIAIVALGESFELVPTVVAEKIRQRDEAAVLLLNERGTETV DEDDPYKDFPIPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=183, Percent_Identity=37.7049180327869, Blast_Score=110, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20620; Mature: 20489
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSLQKQLMKAGLADEKKARKAKQQKREDVNKAKRGEIEMEDPADRARRLREEKAEADR CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QREAQRKAEREKKEIAAQIKQMIEQSRLERNGEVAFQFVQDKKIKKAYVTGNQQKQLERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC QIAIVALGESFELVPTVVAEKIRQRDEAAVLLLNERGTETVDEDDPYKDFPIPDDLMW CEEEEEECCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANSLQKQLMKAGLADEKKARKAKQQKREDVNKAKRGEIEMEDPADRARRLREEKAEADR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QREAQRKAEREKKEIAAQIKQMIEQSRLERNGEVAFQFVQDKKIKKAYVTGNQQKQLERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC QIAIVALGESFELVPTVVAEKIRQRDEAAVLLLNERGTETVDEDDPYKDFPIPDDLMW CEEEEEECCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]