Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 110835329

GI number: 110835329

Start: 2796392

End: 2797675

Strand: Reverse

Name: tnpA [H]

Synonym: ABO_2468

Alternate gene names: 110835329

Gene position: 2797675-2796392 (Counterclockwise)

Preceding gene: 110835332

Following gene: 110835322

Centisome position: 89.66

GC content: 60.36

Gene sequence:

>1284_bases
ATGACCGAAATGCCCGACAACATCCTGCACCTGCCTGAGTACCAGGTGCTGGGCTGCAAATCCACCGACGACGAAATGCA
CTTCCAGGTGGACGCGCCCGATCCCATCGCCTGCGAGGAATGCGGCGTGCAGGGTGAGTTCGTGCGGTTCGGCAAGCGTG
ATGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACCCTCTGGGTGGTCCGCCGCCGGTACACCTGCCGGGCC
TGCAAGACCACCTTCAGGCCCCAGCTACCGGAGATGGTGGACGGCTTCCGCATGACGCTGCGGCTGCATGAATACGTGGA
GAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCTTGGACGAGAAGACGGTACGTGACATCTTCA
ACGCCCGCGCCGAGTTTCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGCATTCTGGGCATCGACGAGCTGTACCTGAAC
AAGCGCTACCGCTGCATCCTGACCAACATCGAGGAGCGAACCCTGCTCGACCTGCTGGCCACCCGCCGTCAGGACGTGGT
GACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCCTACCGGGCAG
CGGTCAAGGCGGTGCTGCCACAGGCCCGTATCGTGGTCGATAAGTTCCATGTGGTGCGCATGGCCAACGATGCCTTGGAG
AAGGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCCTCCCAGAGCCGAACCCTCAAAGGAGACCGGAAAATCCTGCTGAA
ACGCGCTCACGAAGTCTCAGACCGGGAGCGACTCATCATGGAGACCTGGACAGGCGCATTCCCGCAACTGCTGGCCGCCT
ACGAGCACAAGGAACGCTTCTACGGCATCTGGAACGCCACCACCCGGCCACAGGCAGAAGCCGCCCTGGATGACTGGATA
GCCACCATTCCAAAGGGCCAGAAGGAAGTCTGGAGCGATCTGGTCAGGGCAGTGGGCAACTGGCGCGAAGAGATCATGAC
CTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCAACCGACTGGCCAAGGACAAGAACCGTGAAG
GGCGTGGTTACTCGTTCGAGGTGATGCGGGCACGAATGCTCTACACCACGAAGCACAAGAAGAAGGCCCCGACTGCGAAG
GTCTCTCCGTTCTACACCATCGGTTACGGACTGCCGGACTTCGCAGAGGAACTCAACTACGGGGTCGATCTATCAACCAT
CTGA

Upstream 100 bases:

>100_bases
TAGTATATAAATACTAGGGGGTAGTATGCTTGTTTGCAAGAGAGGAGAGGTAGGTGAAGCTCACCAACGTGACACTCGCC
AGCCGTAAGGAGCACGCCGC

Downstream 100 bases:

>100_bases
GGGTGGTATCAGGTTGGTGGGGTGAAGGTGCCCCATCAACCATTAAATCCGTATACCCAAATAAAATAGCTTTGCCGGCG
ATTGGTGTCCCAGCTTTGCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MTEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA
CKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN
KRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWNATTRPQAEAALDDWI
ATIPKGQKEVWSDLVRAVGNWREEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYTIGYGLPDFAEELNYGVDLSTI

Sequences:

>Translated_427_residues
MTEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA
CKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN
KRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWNATTRPQAEAALDDWI
ATIPKGQKEVWSDLVRAVGNWREEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYTIGYGLPDFAEELNYGVDLSTI
>Mature_426_residues
TEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRAC
KTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNK
RYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALEK
VRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWNATTRPQAEAALDDWIA
TIPKGQKEVWSDLVRAVGNWREEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKV
SPFYTIGYGLPDFAEELNYGVDLSTI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 50029; Mature: 49898

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDL
CCCCCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCHHHCCCCCHHHHCCCCCCCCCCC
PIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAA
CCCCCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
QTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCEEEEEECCCHHHHHHHHH
TRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERF
HHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
YGIWNATTRPQAEAALDDWIATIPKGQKEVWSDLVRAVGNWREEIMTYFETDMPVTNAYT
EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYTIGYGLPDFAEELNY
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHCCC
GVDLSTI
CCCCCCC
>Mature Secondary Structure 
TEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDL
CCCCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCHHHCCCCCHHHHCCCCCCCCCCC
PIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAA
CCCCCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
QTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCEEEEEECCCHHHHHHHHH
TRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERF
HHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
YGIWNATTRPQAEAALDDWIATIPKGQKEVWSDLVRAVGNWREEIMTYFETDMPVTNAYT
EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYTIGYGLPDFAEELNY
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHCCC
GVDLSTI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]