| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ppx [H]
Identifier: 110835322
GI number: 110835322
Start: 2786919
End: 2788409
Strand: Reverse
Name: ppx [H]
Synonym: ABO_2461
Alternate gene names: 110835322
Gene position: 2788409-2786919 (Counterclockwise)
Preceding gene: 110835329
Following gene: 110835319
Centisome position: 89.37
GC content: 56.2
Gene sequence:
>1491_bases ATGGAGCATGGCGAACATCTGGCTGCCATTGATTTGGGGTCGAACAGTTTTCATATGGTGGTAGCCCGACAAGCGCAGGG AGAAATCCAGATTCTCGACGGGTTGTCGGAGAAGGTGCAATTGGGGGCCGGCCTAGACCGGGAAAATCGCTTGGATGAGG AAACAGTGGAGAGGGCGCTGGAGTGCCTTGGCCGGTTTGCCCAACGGATTGCCGGAATTCCACGCGGTAGCGTGCGGGTG GTGGGGACCAATACCCTGCGCCAAGCCCGTAATGCCCGGGATTTTATCCGCCGCGCGGAAGCCGTGTTGGGCCACGATAT TGAGGTGGTAGCCGGACGAGAGGAAGCGCGGCTGATTTACCTGGGGGTGGCCCACACCTTGGCTGATGACGCTGGGCAGC GGCTGGTGGTGGATATTGGCGGTGGTTCCACTGAGCTGATCATTGGTGAGCGGTTTGAATCCACGGAAACCGAGTCGTTG CATATGGGCTGTGTTAGCTTTGCCCAGCGTTTTTTCCCCAATGGCGAGATCACGGAAAAAGCCTTTGATCGGGCGGTGAC GGCGGCACGCCAGGAAGTGTTATCAATCCATGCCAATTATCAGCGCCTTGGCTGGCAGCAGGTGGTGGGGGCCTCGGGCA CGATCAAGGCAATCAGCCTTGTGTGTGTGGAGAACGGTTGGTCGGAATTCGGCATTAGCATGGAAGGGATGAAAAAAGCC CGTAAACGGGTGATTAAAGCTGGTGCCGCAGACAAGCTGGGATTGAAGGGGTTACGTGAGGATCGACAGCCTATTTTTGC TTCTGGTCTGGCCATTTTGTACGGCATTTTCGAGCAGTTAGGCATTGAACAAATGGATGTTTCCAGTGGCGCTTTACGTG AAGGGTTACTGTACGACTTACTGGGGCGCTTTGGTCACGAGGATGTGCGTGATCGCAGTATTCAAGCGCTGATGAATCGC CATCATGTGGAAAGCAGCCAAGCAGAGCGAGTGTGTGCCACAGCCCAGACGTTATACCAGCAGGTAGCCAGTGATTGGCA GATCGAGGGAGACGAGGCCGCGGATACGCTCCGTTGGGGCTGTTTGCTCCATGAGGTGGGATTGGCGGTGTCTCATAGCC AGTTTCACAAACACGGTGCTTATCTGGTGACTAACTCGGATCTGCCCGGTTTTTCTCGTCAGGAGCAGCAAATGGTGGCG TTGATGGTGCGCGGTCATCGTCGCAAGGTGCCCTTGGCTGCGCTGGCGGAATTGCCGGAGGATGAACAAACCTGCTTGCT GCGACTATGTTTGGTACTGCGTTTAGCGGTGCGGTTGCACCATGCCCGTAGTGATGAAAAGGTGCCTGAAATTCACGTGC AGGCAACGGGTAATCGTCTTGCCATTACCTTTCCGGTTGGCTGGTTGGAGCAGCACCCGCTTACCCAAGCGGACCTGGAG CAGGAACTCGATTACTTTCAGGCGGCAGGGTACCAGCTGGTGTTGGCGTGA
Upstream 100 bases:
>100_bases AGAATTTCAAGCGAGGTCGTTAATTATCGCTGTAGTCGCTGCCTATGACATCGTAACGCCATGATTTTTGGATAGAATTG GCCCAAAAGAAGGAGTGACT
Downstream 100 bases:
>100_bases AAGGAATCGCTGCGAGCCGCTAGCGATGAGGAAAATAGCCTTAAAATGGGGGGGCGCGCTTTAGCCGGCGCAACCCCTTT AAAGTTAGAAGCTGTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MEHGEHLAAIDLGSNSFHMVVARQAQGEIQILDGLSEKVQLGAGLDRENRLDEETVERALECLGRFAQRIAGIPRGSVRV VGTNTLRQARNARDFIRRAEAVLGHDIEVVAGREEARLIYLGVAHTLADDAGQRLVVDIGGGSTELIIGERFESTETESL HMGCVSFAQRFFPNGEITEKAFDRAVTAARQEVLSIHANYQRLGWQQVVGASGTIKAISLVCVENGWSEFGISMEGMKKA RKRVIKAGAADKLGLKGLREDRQPIFASGLAILYGIFEQLGIEQMDVSSGALREGLLYDLLGRFGHEDVRDRSIQALMNR HHVESSQAERVCATAQTLYQQVASDWQIEGDEAADTLRWGCLLHEVGLAVSHSQFHKHGAYLVTNSDLPGFSRQEQQMVA LMVRGHRRKVPLAALAELPEDEQTCLLRLCLVLRLAVRLHHARSDEKVPEIHVQATGNRLAITFPVGWLEQHPLTQADLE QELDYFQAAGYQLVLA
Sequences:
>Translated_496_residues MEHGEHLAAIDLGSNSFHMVVARQAQGEIQILDGLSEKVQLGAGLDRENRLDEETVERALECLGRFAQRIAGIPRGSVRV VGTNTLRQARNARDFIRRAEAVLGHDIEVVAGREEARLIYLGVAHTLADDAGQRLVVDIGGGSTELIIGERFESTETESL HMGCVSFAQRFFPNGEITEKAFDRAVTAARQEVLSIHANYQRLGWQQVVGASGTIKAISLVCVENGWSEFGISMEGMKKA RKRVIKAGAADKLGLKGLREDRQPIFASGLAILYGIFEQLGIEQMDVSSGALREGLLYDLLGRFGHEDVRDRSIQALMNR HHVESSQAERVCATAQTLYQQVASDWQIEGDEAADTLRWGCLLHEVGLAVSHSQFHKHGAYLVTNSDLPGFSRQEQQMVA LMVRGHRRKVPLAALAELPEDEQTCLLRLCLVLRLAVRLHHARSDEKVPEIHVQATGNRLAITFPVGWLEQHPLTQADLE QELDYFQAAGYQLVLA >Mature_496_residues MEHGEHLAAIDLGSNSFHMVVARQAQGEIQILDGLSEKVQLGAGLDRENRLDEETVERALECLGRFAQRIAGIPRGSVRV VGTNTLRQARNARDFIRRAEAVLGHDIEVVAGREEARLIYLGVAHTLADDAGQRLVVDIGGGSTELIIGERFESTETESL HMGCVSFAQRFFPNGEITEKAFDRAVTAARQEVLSIHANYQRLGWQQVVGASGTIKAISLVCVENGWSEFGISMEGMKKA RKRVIKAGAADKLGLKGLREDRQPIFASGLAILYGIFEQLGIEQMDVSSGALREGLLYDLLGRFGHEDVRDRSIQALMNR HHVESSQAERVCATAQTLYQQVASDWQIEGDEAADTLRWGCLLHEVGLAVSHSQFHKHGAYLVTNSDLPGFSRQEQQMVA LMVRGHRRKVPLAALAELPEDEQTCLLRLCLVLRLAVRLHHARSDEKVPEIHVQATGNRLAITFPVGWLEQHPLTQADLE QELDYFQAAGYQLVLA
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=496, Percent_Identity=44.1532258064516, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI48994966, Length=478, Percent_Identity=42.0502092050209, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 54867; Mature: 54867
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHGEHLAAIDLGSNSFHMVVARQAQGEIQILDGLSEKVQLGAGLDRENRLDEETVERAL CCCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHH ECLGRFAQRIAGIPRGSVRVVGTNTLRQARNARDFIRRAEAVLGHDIEVVAGREEARLIY HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEE LGVAHTLADDAGQRLVVDIGGGSTELIIGERFESTETESLHMGCVSFAQRFFPNGEITEK EEHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH AFDRAVTAARQEVLSIHANYQRLGWQQVVGASGTIKAISLVCVENGWSEFGISMEGMKKA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEEEEEECCHHHHCCCHHHHHHH RKRVIKAGAADKLGLKGLREDRQPIFASGLAILYGIFEQLGIEQMDVSSGALREGLLYDL HHHHHHCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LGRFGHEDVRDRSIQALMNRHHVESSQAERVCATAQTLYQQVASDWQIEGDEAADTLRWG HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CLLHEVGLAVSHSQFHKHGAYLVTNSDLPGFSRQEQQMVALMVRGHRRKVPLAALAELPE HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCC DEQTCLLRLCLVLRLAVRLHHARSDEKVPEIHVQATGNRLAITFPVGWLEQHPLTQADLE CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCHHCCCCCCHHHHH QELDYFQAAGYQLVLA HHHHHHHHCCEEEEEC >Mature Secondary Structure MEHGEHLAAIDLGSNSFHMVVARQAQGEIQILDGLSEKVQLGAGLDRENRLDEETVERAL CCCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHH ECLGRFAQRIAGIPRGSVRVVGTNTLRQARNARDFIRRAEAVLGHDIEVVAGREEARLIY HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEE LGVAHTLADDAGQRLVVDIGGGSTELIIGERFESTETESLHMGCVSFAQRFFPNGEITEK EEHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH AFDRAVTAARQEVLSIHANYQRLGWQQVVGASGTIKAISLVCVENGWSEFGISMEGMKKA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEEEEEECCHHHHCCCHHHHHHH RKRVIKAGAADKLGLKGLREDRQPIFASGLAILYGIFEQLGIEQMDVSSGALREGLLYDL HHHHHHCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LGRFGHEDVRDRSIQALMNRHHVESSQAERVCATAQTLYQQVASDWQIEGDEAADTLRWG HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CLLHEVGLAVSHSQFHKHGAYLVTNSDLPGFSRQEQQMVALMVRGHRRKVPLAALAELPE HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCC DEQTCLLRLCLVLRLAVRLHHARSDEKVPEIHVQATGNRLAITFPVGWLEQHPLTQADLE CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCHHCCCCCCHHHHH QELDYFQAAGYQLVLA HHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]