Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835317

Identifier: 110835317

GI number: 110835317

Start: 2781449

End: 2782084

Strand: Reverse

Name: 110835317

Synonym: ABO_2456

Alternate gene names: NA

Gene position: 2782084-2781449 (Counterclockwise)

Preceding gene: 110835318

Following gene: 110835312

Centisome position: 89.17

GC content: 54.87

Gene sequence:

>636_bases
ATGAGCGCTAACAACCGTATCTGGTTTTTTATTCGTAAGTCGCTGCTGGGTGGGCTCACCATCCTGTTGCCGATTTCCAT
TATCGTGTTCTTCTTCAAATGGATTTATCAGACCGTGACCGAGCTGATTTCTCCTTTTACCTCAGTGTTTATCAGTGCTT
TCGGGTTGCCAAAGTTTGTCGCAGATTGGCTATCGGTGCTGGCGGTCATGGTGCTGTGTTTTCTAGTTGGCACTCTGGTG
GCAACCCGAGTGGGAAGCTGGGCCTGGCAGCAGTGGGAAGAACATGTGATGACTCGCTTACCCGGATACACCACTGTCCG
TGAAGTGATTGCCCAGTTGATGGGGAGTAGCGCAGATAGCCCATTCAGCCGGGGCGAGGTGGCGCGGGTGTGGCTCTATG
GGAGAGATACGGACGTGTCTGTTACTGCGCTGGTCACGTCCCGGCACGCGGATGGTCACGTCACTGTGTTCGTCCCCACT
GGGCCCAACCCCACCAGCGGATTCATTTACCACCTAGATGCATCACTGGTGGAGCTGCATCCAGAAATCGGTGTGGAAAG
CATGATGAAAACGGTGGTCTCTTGCGGGGCGGGTACCGCGCACTTGTTCAAGACGGATACCCCCAAAGCGCCCTAG

Upstream 100 bases:

>100_bases
ACGAAGAGCCTGCACGTCGGGATTGAGCCTAGGCTTGTACAGGCGCGTATGAGCTGGTGGGCAGGCTCGCTTGCCGAAAT
AATAGAGGAATTCTCCGCCG

Downstream 100 bases:

>100_bases
CATTTTCATCGAAGCCGCTAGGACGCCGAGTCTGGTTTGCCACGCGAAAGCCACGTGCTCCTATAAAACAAGTGGTGTTT
GCGGGCTTCCGGTGCTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSANNRIWFFIRKSLLGGLTILLPISIIVFFFKWIYQTVTELISPFTSVFISAFGLPKFVADWLSVLAVMVLCFLVGTLV
ATRVGSWAWQQWEEHVMTRLPGYTTVREVIAQLMGSSADSPFSRGEVARVWLYGRDTDVSVTALVTSRHADGHVTVFVPT
GPNPTSGFIYHLDASLVELHPEIGVESMMKTVVSCGAGTAHLFKTDTPKAP

Sequences:

>Translated_211_residues
MSANNRIWFFIRKSLLGGLTILLPISIIVFFFKWIYQTVTELISPFTSVFISAFGLPKFVADWLSVLAVMVLCFLVGTLV
ATRVGSWAWQQWEEHVMTRLPGYTTVREVIAQLMGSSADSPFSRGEVARVWLYGRDTDVSVTALVTSRHADGHVTVFVPT
GPNPTSGFIYHLDASLVELHPEIGVESMMKTVVSCGAGTAHLFKTDTPKAP
>Mature_210_residues
SANNRIWFFIRKSLLGGLTILLPISIIVFFFKWIYQTVTELISPFTSVFISAFGLPKFVADWLSVLAVMVLCFLVGTLVA
TRVGSWAWQQWEEHVMTRLPGYTTVREVIAQLMGSSADSPFSRGEVARVWLYGRDTDVSVTALVTSRHADGHVTVFVPTG
PNPTSGFIYHLDASLVELHPEIGVESMMKTVVSCGAGTAHLFKTDTPKAP

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23297; Mature: 23166

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANNRIWFFIRKSLLGGLTILLPISIIVFFFKWIYQTVTELISPFTSVFISAFGLPKFV
CCCCCEEEHEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ADWLSVLAVMVLCFLVGTLVATRVGSWAWQQWEEHVMTRLPGYTTVREVIAQLMGSSADS
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PFSRGEVARVWLYGRDTDVSVTALVTSRHADGHVTVFVPTGPNPTSGFIYHLDASLVELH
CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECHHHHHHC
PEIGVESMMKTVVSCGAGTAHLFKTDTPKAP
CCCCHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SANNRIWFFIRKSLLGGLTILLPISIIVFFFKWIYQTVTELISPFTSVFISAFGLPKFV
CCCCEEEHEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ADWLSVLAVMVLCFLVGTLVATRVGSWAWQQWEEHVMTRLPGYTTVREVIAQLMGSSADS
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PFSRGEVARVWLYGRDTDVSVTALVTSRHADGHVTVFVPTGPNPTSGFIYHLDASLVELH
CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECHHHHHHC
PEIGVESMMKTVVSCGAGTAHLFKTDTPKAP
CCCCHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA