Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835302

Identifier: 110835302

GI number: 110835302

Start: 2762808

End: 2764043

Strand: Reverse

Name: 110835302

Synonym: ABO_2441

Alternate gene names: NA

Gene position: 2764043-2762808 (Counterclockwise)

Preceding gene: 110835304

Following gene: 110835301

Centisome position: 88.59

GC content: 56.88

Gene sequence:

>1236_bases
GTGAGCCCTTGGCGCCAAGATATGGAAACCGAATTTATGTCCCTGTGGGAACAATGGCGGCCATGGATCCGTGAGCAACG
GAGTTTGCTACGTGAGCTGATTCTAATGTTGCTAGCGATGCTGGTGGTCGGCGTTTATTTTCTTGAGCATTTTTCTGCCC
GCCTGGAGCAGGAGCGTAAAGTGCAGCTGGAGGCACTAGCCGAACAAACGGCGCGTCGTGCGGCAGAGGCGCTGGCCAGC
GACGACTCTATTAGCATCAACTTGATTGGCCGGGAAACCGTACAGCTGAAACCGGTGGCGGGTATCCGTTTCGAAAATAC
GGCTGGAGATAACGTGGGAGCGAGCGGTAGGAAAACCTCCTCGCTGCGCGTCACGGTGCCGGCGGCCCTACCGGACGGTG
AATTGGCGGGTACCTTGATCTTACTGGGTAACGATGCGCTATTGCCGCGCAAACAGATTGAAGCGGGGTTTGTGCTGGCG
GTGTTGAGTCTGCTGCTGCTTCGGTTAGCCGCGGCACTGATTCAGCAGCGCCTGCGGCCTTTGCCAGTCCAACCAGGGAC
CACTGAGACGGTGAAATCTATGGACTCACCGTCTCTGTTTCAGCCTATGGGTGCCCCGGCCTCGCCAATGGGGAAATGGA
CGGTGCCAGAGGGGGAAAAAATACAGGCCCAGCTGCGCCTTAGTGTTGTGAATTTTCCCCATATCAAGCAACGCTACACT
GAAGACGCTCTGAAAGAGGTGCTGGCGGAATACCAGCAACTGTTGGACCAGGTGGCAACCCTTTACGGAGGCCATCAAGG
GCCGGTAATTGGCAAACAGGCGGGTTTGTATTTCTATCAAACCCCGGTTTCTCAAGCGGCGTTTTCGGCTTTGTGTGCGG
GCTTATTGTTTCTGCGTGTGGTGCGCTTGTTGGCGCCGCAGCGTAAACAAGCGGGAAAAATCTCTCTCGAGTTCAAGGCA
TTGGTAACCGCGGAGCCGGATCAGGAGGAAGCTTGGGCTTTATGTGTGGCCGGCGTGCCCGGTCGTCTGAATGTGCCGGA
TAGCCAGTTGACCCTGGCCGAGCTAGATGTGAAAGCGCTCTACCAACCAGAGAAGGCTCAGGTCGTCTGTGCGGGGGATC
ACAGGGTCCGTTTGCAGCCGGTGGAGCAGCTAGCCCATCGCTATCAGTCGCTGTTACGCACTCAGGCGCAAACTTTGCTG
TCTGAGGGCGGTGGCAGTGTTGAGGCCAGTCAGTAA

Upstream 100 bases:

>100_bases
TGAGCACGGTATACTGCTGCCGCAATCATAATGATGACAGTGAGCCCAAGACGGCACGGGGCAACCGGTGTCACTGCAGG
TCACCCGGAGCGCGCAGTGA

Downstream 100 bases:

>100_bases
TTGTGTATGGCTTGTTATAGTGAACACTCGGGGTACGAGGCGACGCAAAGGGTTGTAAGTAACCCGTTTCAATGTAGGGA
TCGCGACGAAGGTACGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSPWRQDMETEFMSLWEQWRPWIREQRSLLRELILMLLAMLVVGVYFLEHFSARLEQERKVQLEALAEQTARRAAEALAS
DDSISINLIGRETVQLKPVAGIRFENTAGDNVGASGRKTSSLRVTVPAALPDGELAGTLILLGNDALLPRKQIEAGFVLA
VLSLLLLRLAAALIQQRLRPLPVQPGTTETVKSMDSPSLFQPMGAPASPMGKWTVPEGEKIQAQLRLSVVNFPHIKQRYT
EDALKEVLAEYQQLLDQVATLYGGHQGPVIGKQAGLYFYQTPVSQAAFSALCAGLLFLRVVRLLAPQRKQAGKISLEFKA
LVTAEPDQEEAWALCVAGVPGRLNVPDSQLTLAELDVKALYQPEKAQVVCAGDHRVRLQPVEQLAHRYQSLLRTQAQTLL
SEGGGSVEASQ

Sequences:

>Translated_411_residues
MSPWRQDMETEFMSLWEQWRPWIREQRSLLRELILMLLAMLVVGVYFLEHFSARLEQERKVQLEALAEQTARRAAEALAS
DDSISINLIGRETVQLKPVAGIRFENTAGDNVGASGRKTSSLRVTVPAALPDGELAGTLILLGNDALLPRKQIEAGFVLA
VLSLLLLRLAAALIQQRLRPLPVQPGTTETVKSMDSPSLFQPMGAPASPMGKWTVPEGEKIQAQLRLSVVNFPHIKQRYT
EDALKEVLAEYQQLLDQVATLYGGHQGPVIGKQAGLYFYQTPVSQAAFSALCAGLLFLRVVRLLAPQRKQAGKISLEFKA
LVTAEPDQEEAWALCVAGVPGRLNVPDSQLTLAELDVKALYQPEKAQVVCAGDHRVRLQPVEQLAHRYQSLLRTQAQTLL
SEGGGSVEASQ
>Mature_410_residues
SPWRQDMETEFMSLWEQWRPWIREQRSLLRELILMLLAMLVVGVYFLEHFSARLEQERKVQLEALAEQTARRAAEALASD
DSISINLIGRETVQLKPVAGIRFENTAGDNVGASGRKTSSLRVTVPAALPDGELAGTLILLGNDALLPRKQIEAGFVLAV
LSLLLLRLAAALIQQRLRPLPVQPGTTETVKSMDSPSLFQPMGAPASPMGKWTVPEGEKIQAQLRLSVVNFPHIKQRYTE
DALKEVLAEYQQLLDQVATLYGGHQGPVIGKQAGLYFYQTPVSQAAFSALCAGLLFLRVVRLLAPQRKQAGKISLEFKAL
VTAEPDQEEAWALCVAGVPGRLNVPDSQLTLAELDVKALYQPEKAQVVCAGDHRVRLQPVEQLAHRYQSLLRTQAQTLLS
EGGGSVEASQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45268; Mature: 45137

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPWRQDMETEFMSLWEQWRPWIREQRSLLRELILMLLAMLVVGVYFLEHFSARLEQERK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLEALAEQTARRAAEALASDDSISINLIGRETVQLKPVAGIRFENTAGDNVGASGRKTS
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCEEECCCCCCCCCCCCCCCC
SLRVTVPAALPDGELAGTLILLGNDALLPRKQIEAGFVLAVLSLLLLRLAAALIQQRLRP
EEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LPVQPGTTETVKSMDSPSLFQPMGAPASPMGKWTVPEGEKIQAQLRLSVVNFPHIKQRYT
CCCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCHHHHHHH
EDALKEVLAEYQQLLDQVATLYGGHQGPVIGKQAGLYFYQTPVSQAAFSALCAGLLFLRV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
VRLLAPQRKQAGKISLEFKALVTAEPDQEEAWALCVAGVPGRLNVPDSQLTLAELDVKAL
HHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHEEEEECCCCCCCCCCCCEEHHHHHHHHH
YQPEKAQVVCAGDHRVRLQPVEQLAHRYQSLLRTQAQTLLSEGGGSVEASQ
CCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SPWRQDMETEFMSLWEQWRPWIREQRSLLRELILMLLAMLVVGVYFLEHFSARLEQERK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLEALAEQTARRAAEALASDDSISINLIGRETVQLKPVAGIRFENTAGDNVGASGRKTS
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCEEECCCCCCCCCCCCCCCC
SLRVTVPAALPDGELAGTLILLGNDALLPRKQIEAGFVLAVLSLLLLRLAAALIQQRLRP
EEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LPVQPGTTETVKSMDSPSLFQPMGAPASPMGKWTVPEGEKIQAQLRLSVVNFPHIKQRYT
CCCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCHHHHHHH
EDALKEVLAEYQQLLDQVATLYGGHQGPVIGKQAGLYFYQTPVSQAAFSALCAGLLFLRV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
VRLLAPQRKQAGKISLEFKALVTAEPDQEEAWALCVAGVPGRLNVPDSQLTLAELDVKAL
HHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHEEEEECCCCCCCCCCCCEEHHHHHHHHH
YQPEKAQVVCAGDHRVRLQPVEQLAHRYQSLLRTQAQTLLSEGGGSVEASQ
CCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA