| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110835277
Identifier: 110835277
GI number: 110835277
Start: 2735501
End: 2735728
Strand: Reverse
Name: 110835277
Synonym: ABO_2416
Alternate gene names: NA
Gene position: 2735728-2735501 (Counterclockwise)
Preceding gene: 110835278
Following gene: 110835274
Centisome position: 87.68
GC content: 49.56
Gene sequence:
>228_bases TTGATGAATCAGCCGAACAATCCCTTGCATGGCGTCACCCTAGAAACGGTGGTGAAGCGCCTGGTTGAACATTATGGCTG GGAAGAGCTGGGTGATCGCATTCGAATTAATTGCTTTATCAGTGATCCCTCAGTGAAATCCAGCTTGAAGTTTTTACGCA AAACCCCCTGGGCGAGGGAGAAAGTGGAAACGTTATTTGTCGACACCTTTTCCCGTGAGCCGCGCTGA
Upstream 100 bases:
>100_bases ACACTCTGGTGTTGCGCCGTAACGACCCCGTGGTGGGGCAGGTTCATGTGCACTTTCCCCGCGAGGGTTACGTGTTGTCC AAGGCTCACTGAAGGGGCTA
Downstream 100 bases:
>100_bases CCACGATAGTCATTAGGCCAATGAACCTAGCGAGGTAATCCGACATAGCAGGCAAGCCGCCTGATCGCCCAAAAGAGGGG GCGCGCGGGCGGGCACCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MMNQPNNPLHGVTLETVVKRLVEHYGWEELGDRIRINCFISDPSVKSSLKFLRKTPWAREKVETLFVDTFSREPR
Sequences:
>Translated_75_residues MMNQPNNPLHGVTLETVVKRLVEHYGWEELGDRIRINCFISDPSVKSSLKFLRKTPWAREKVETLFVDTFSREPR >Mature_75_residues MMNQPNNPLHGVTLETVVKRLVEHYGWEELGDRIRINCFISDPSVKSSLKFLRKTPWAREKVETLFVDTFSREPR
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8844; Mature: 8844
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNQPNNPLHGVTLETVVKRLVEHYGWEELGDRIRINCFISDPSVKSSLKFLRKTPWARE CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCHH KVETLFVDTFSREPR HHHHHHHHHCCCCCC >Mature Secondary Structure MMNQPNNPLHGVTLETVVKRLVEHYGWEELGDRIRINCFISDPSVKSSLKFLRKTPWARE CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCHH KVETLFVDTFSREPR HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA