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The map label for this gene is rimK [H]

Identifier: 110835273

GI number: 110835273

Start: 2731487

End: 2732053

Strand: Direct

Name: rimK [H]

Synonym: ABO_2412

Alternate gene names: 110835273

Gene position: 2731487-2732053 (Clockwise)

Preceding gene: 110835271

Following gene: 110835275

Centisome position: 87.54

GC content: 51.68

Gene sequence:

>567_bases
ATGAAAAAAGGATTTATCGCTTTCATTACTGCCTCATTACTCAGCAGCACTGGCATGGCCATGGCTACCCCCCCTAGCAG
CCCGAACGTATTTGGCTGGGTGGAAAAGTCCATGTTGATGCCCTGGGGTGTGGAATTGAAAACCAAGCTGGACAGCGGCG
CGCTCACTTCGTCTCTGCACGCCACCGATGTGGATGTTTTCGAGAAAGATGGCGACGACTGGGTACGCTTTACCGTGGAT
GTAGTGGATGAGGCCACCGGCAAAAAAGTGGAAAAAACCTTTGAGAAACCACGCTACCGTAAAGTGGTGATTCGGGGTGC
CGGCGGCACCGAGCGTCGTCCGGTGGTATTAATGAAAGTGTGCATGGGCAACACGGTATATGAAGAACAGTTCACCCTGA
ATGACCGGTCTGACATGATTTATCCGGTTCTTCTCGGCCGGCGCACCATTTCTCACTTGGGTTATCTGGACGTGACACAG
ACCTTCCAGCATTCACCCCAATGCGATGAGAATTCGCCGGTGAAAATGGATAAAGACCAACAGGACGATAAGGACATTGA
GGACTGA

Upstream 100 bases:

>100_bases
TTGCCGGGGAACGGTCTGCAGCGAATACAGTCATACTCTGCCAGCGGGGTCGGACGACTCACCCTTTTACGCAACCTATT
TTTATCAACAAGGAGCGCCC

Downstream 100 bases:

>100_bases
GCAGCAACGCGCATCGCTGTCATCAAATGATTAAACGCATTACCCGCGCCCCTGAATGGGGAGCGCGGGCAAAGCCTTTG
CGAAACGGCGGTTACGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKKGFIAFITASLLSSTGMAMATPPSSPNVFGWVEKSMLMPWGVELKTKLDSGALTSSLHATDVDVFEKDGDDWVRFTVD
VVDEATGKKVEKTFEKPRYRKVVIRGAGGTERRPVVLMKVCMGNTVYEEQFTLNDRSDMIYPVLLGRRTISHLGYLDVTQ
TFQHSPQCDENSPVKMDKDQQDDKDIED

Sequences:

>Translated_188_residues
MKKGFIAFITASLLSSTGMAMATPPSSPNVFGWVEKSMLMPWGVELKTKLDSGALTSSLHATDVDVFEKDGDDWVRFTVD
VVDEATGKKVEKTFEKPRYRKVVIRGAGGTERRPVVLMKVCMGNTVYEEQFTLNDRSDMIYPVLLGRRTISHLGYLDVTQ
TFQHSPQCDENSPVKMDKDQQDDKDIED
>Mature_188_residues
MKKGFIAFITASLLSSTGMAMATPPSSPNVFGWVEKSMLMPWGVELKTKLDSGALTSSLHATDVDVFEKDGDDWVRFTVD
VVDEATGKKVEKTFEKPRYRKVVIRGAGGTERRPVVLMKVCMGNTVYEEQFTLNDRSDMIYPVLLGRRTISHLGYLDVTQ
TFQHSPQCDENSPVKMDKDQQDDKDIED

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 21117; Mature: 21117

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGFIAFITASLLSSTGMAMATPPSSPNVFGWVEKSMLMPWGVELKTKLDSGALTSSLH
CCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHCCCCCCCCEEEEECCCCCCCCCCC
ATDVDVFEKDGDDWVRFTVDVVDEATGKKVEKTFEKPRYRKVVIRGAGGTERRPVVLMKV
CCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEE
CMGNTVYEEQFTLNDRSDMIYPVLLGRRTISHLGYLDVTQTFQHSPQCDENSPVKMDKDQ
HHCCEEEECEEEECCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC
QDDKDIED
CCCCCCCC
>Mature Secondary Structure
MKKGFIAFITASLLSSTGMAMATPPSSPNVFGWVEKSMLMPWGVELKTKLDSGALTSSLH
CCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHCCCCCCCCEEEEECCCCCCCCCCC
ATDVDVFEKDGDDWVRFTVDVVDEATGKKVEKTFEKPRYRKVVIRGAGGTERRPVVLMKV
CCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEE
CMGNTVYEEQFTLNDRSDMIYPVLLGRRTISHLGYLDVTQTFQHSPQCDENSPVKMDKDQ
HHCCEEEECEEEECCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC
QDDKDIED
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA