Click here to switch to the map view.

The map label for this gene is ycbL [H]

Identifier: 110835247

GI number: 110835247

Start: 2710437

End: 2711078

Strand: Direct

Name: ycbL [H]

Synonym: ABO_2386

Alternate gene names: 110835247

Gene position: 2710437-2711078 (Clockwise)

Preceding gene: 110835245

Following gene: 110835248

Centisome position: 86.87

GC content: 57.32

Gene sequence:

>642_bases
ATGAAGTACGCCATCGTGCCGGTCACCCCGTTCCAACAAAACTGTTCTATTCTTAAATGCGAAGCGACCAACAAGGTGGC
TATCGTGGACCCAGGCGGCGACCTGGAAAACATCCTCACCGCCCTTGAGCAAATAGGCGGCACACCGGAAAAAATCCTCG
TCACCCACGCGCACCTTGACCATATTGGTGCCGTGGCAGACCTGGCAGAGCGGCTATCTCTGCCCATTGAAGGCCCGCAC
CGGGACGATCAATTCTGGATTGATATGCTGCCCCAGCAAGCACAAATGATGGGCTTTGCTCCATCACGCCCATTCACGCC
AGACCGCTGGCTGGAAGGCGGCGATAGCGTCACCGTGGGGGAAACCCGTTTCGAAGTGCGCCACTGCCCCGGGCACACTC
CCGGCCACGTAGTGTTCTACCAGCCCGAAGCAAAACTGGTGGTGGTGGGTGATGTCCTATTTAACGGTTCCATAGGCCGC
ACGGATTTCCCCAAAGGCGACCACGACACACTGATCCAAGCGATCAAGGACCAGCTGCTAACCTTGGACGACGACGTGTC
CTTTATTCCCGGCCACGGCCCCATGTCCACCATTGGCCATGAACGCAGCCACAACCCTTTCGTATCTGGCAAACACGGAT
AA

Upstream 100 bases:

>100_bases
AATCTGCCACTATTTATCCTTTCGGCCCAACGGTGGAGGTATGAATCCTTACCCAAATTAGCGCTATACTGCGGGCACAT
TCTCCACCGAATAGATAGCC

Downstream 100 bases:

>100_bases
ACATGGATTCAGTGGTAATGAAGTGGCTGCTCACCGTGATGGTGCTGCTGGTCGGCTGGGTATTGTCCATCGCCCTGCGT
GGGGCAACCAAACGGCTGGG

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKYAIVPVTPFQQNCSILKCEATNKVAIVDPGGDLENILTALEQIGGTPEKILVTHAHLDHIGAVADLAERLSLPIEGPH
RDDQFWIDMLPQQAQMMGFAPSRPFTPDRWLEGGDSVTVGETRFEVRHCPGHTPGHVVFYQPEAKLVVVGDVLFNGSIGR
TDFPKGDHDTLIQAIKDQLLTLDDDVSFIPGHGPMSTIGHERSHNPFVSGKHG

Sequences:

>Translated_213_residues
MKYAIVPVTPFQQNCSILKCEATNKVAIVDPGGDLENILTALEQIGGTPEKILVTHAHLDHIGAVADLAERLSLPIEGPH
RDDQFWIDMLPQQAQMMGFAPSRPFTPDRWLEGGDSVTVGETRFEVRHCPGHTPGHVVFYQPEAKLVVVGDVLFNGSIGR
TDFPKGDHDTLIQAIKDQLLTLDDDVSFIPGHGPMSTIGHERSHNPFVSGKHG
>Mature_213_residues
MKYAIVPVTPFQQNCSILKCEATNKVAIVDPGGDLENILTALEQIGGTPEKILVTHAHLDHIGAVADLAERLSLPIEGPH
RDDQFWIDMLPQQAQMMGFAPSRPFTPDRWLEGGDSVTVGETRFEVRHCPGHTPGHVVFYQPEAKLVVVGDVLFNGSIGR
TDFPKGDHDTLIQAIKDQLLTLDDDVSFIPGHGPMSTIGHERSHNPFVSGKHG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=106, Percent_Identity=35.8490566037736, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787158, Length=208, Percent_Identity=55.2884615384615, Blast_Score=261, Evalue=3e-71,
Organism=Caenorhabditis elegans, GI17538952, Length=200, Percent_Identity=26, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23297; Mature: 23297

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAIVPVTPFQQNCSILKCEATNKVAIVDPGGDLENILTALEQIGGTPEKILVTHAHLD
CCEEEEECCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCHHEEEEEHHHH
HIGAVADLAERLSLPIEGPHRDDQFWIDMLPQQAQMMGFAPSRPFTPDRWLEGGDSVTVG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCHHHHCCCCEEEEC
ETRFEVRHCPGHTPGHVVFYQPEAKLVVVGDVLFNGSIGRTDFPKGDHDTLIQAIKDQLL
CCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE
TLDDDVSFIPGHGPMSTIGHERSHNPFVSGKHG
EECCCCCEECCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYAIVPVTPFQQNCSILKCEATNKVAIVDPGGDLENILTALEQIGGTPEKILVTHAHLD
CCEEEEECCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCHHEEEEEHHHH
HIGAVADLAERLSLPIEGPHRDDQFWIDMLPQQAQMMGFAPSRPFTPDRWLEGGDSVTVG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCHHHHCCCCEEEEC
ETRFEVRHCPGHTPGHVVFYQPEAKLVVVGDVLFNGSIGRTDFPKGDHDTLIQAIKDQLL
CCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE
TLDDDVSFIPGHGPMSTIGHERSHNPFVSGKHG
EECCCCCEECCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]