| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is phnA [C]
Identifier: 110835242
GI number: 110835242
Start: 2705284
End: 2705862
Strand: Reverse
Name: phnA [C]
Synonym: ABO_2381
Alternate gene names: 110835242
Gene position: 2705862-2705284 (Counterclockwise)
Preceding gene: 110835243
Following gene: 110835241
Centisome position: 86.72
GC content: 54.75
Gene sequence:
>579_bases ATGACACTGGAATCTTCGTTGCTTGCCCGCGCCAATTCTTGTTGTGAGCTTTGTGGGGCGAGCAATGCTCTTGCTGTATA TCCTGTACCCCCTGAATCCGATGGCAGTGCCGAGCAAAGCGTACTGCTGTGTGAAACCTGCCAAACCCAGCTGGATAATC CCGGCAATGAAGACGTTAATCACTGGCGTTGCCTTAACGACAGCATGTGGAGCCAGGTGCCCGCTGTGCAGGTGCTGGCA TGGCGAATGCTAACGCGTTTGCAGGGGGAAGGCTGGCCCCAGGATCTGCTTGATATGCTTTACCTGGAGGACGACACCCT CGCCTGGGCCCAGGCTACAGGGGAAGGCCAGAATGAAGAAGCGCGGGAATTACACCGCGATAGTAATGGCGCCGTGTTAG AAGCCGGCGATTCGGTCACGCTGATTAAAGACCTGAACGTGAAAGGCGCCAACTTCACCGCCAAACGCGGCACCCCAGTG CGCAATATCTCTTTGGTGCAGGATAATCCTGAGCACATTGAAGGTCGGGTTGAAGGCCAGCGGATTGTTATTCTGACTCA GTTCGTGAAGAAAAACTGA
Upstream 100 bases:
>100_bases GACCATGGTTAGTGACGACTTTTTCCGGCAATGGCGTTCAAGGTGCCCGCTGGGGGGCCGCAAATCGGTTATAATGTGGC CCCGATAAAGGAGCCGTTAC
Downstream 100 bases:
>100_bases TGCCCTGTAGCCTGATCCTCGGAGGCATTCGTTCCGGCAAAAGTGCGTTGGCGGAAAAGCGCGTTACCGAGTCAGGCGAA CCGGTGGTATATGTGGCCAC
Product: phnA protein
Products: NA
Alternate protein names: PhnA Protein-Like Protein; Alkylphosphonate Uptake Protein; PhnA-Like Protein; Zn-Ribbon-Containing Protein; Protein PhnA; PhnA Zinc-Ribbon Family; Protein Involved In Phosphonate Metabolism; Phosphonate Metabolism Zn-Ribbon-Containing Protein; Phosphonoacetate Hydrolase; Phosphonoacetate Hydrolase PhnA; Phna Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTLESSLLARANSCCELCGASNALAVYPVPPESDGSAEQSVLLCETCQTQLDNPGNEDVNHWRCLNDSMWSQVPAVQVLA WRMLTRLQGEGWPQDLLDMLYLEDDTLAWAQATGEGQNEEARELHRDSNGAVLEAGDSVTLIKDLNVKGANFTAKRGTPV RNISLVQDNPEHIEGRVEGQRIVILTQFVKKN
Sequences:
>Translated_192_residues MTLESSLLARANSCCELCGASNALAVYPVPPESDGSAEQSVLLCETCQTQLDNPGNEDVNHWRCLNDSMWSQVPAVQVLA WRMLTRLQGEGWPQDLLDMLYLEDDTLAWAQATGEGQNEEARELHRDSNGAVLEAGDSVTLIKDLNVKGANFTAKRGTPV RNISLVQDNPEHIEGRVEGQRIVILTQFVKKN >Mature_191_residues TLESSLLARANSCCELCGASNALAVYPVPPESDGSAEQSVLLCETCQTQLDNPGNEDVNHWRCLNDSMWSQVPAVQVLAW RMLTRLQGEGWPQDLLDMLYLEDDTLAWAQATGEGQNEEARELHRDSNGAVLEAGDSVTLIKDLNVKGANFTAKRGTPVR NISLVQDNPEHIEGRVEGQRIVILTQFVKKN
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21163; Mature: 21032
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLESSLLARANSCCELCGASNALAVYPVPPESDGSAEQSVLLCETCQTQLDNPGNEDVN CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCC HWRCLNDSMWSQVPAVQVLAWRMLTRLQGEGWPQDLLDMLYLEDDTLAWAQATGEGQNEE CEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHH ARELHRDSNGAVLEAGDSVTLIKDLNVKGANFTAKRGTPVRNISLVQDNPEHIEGRVEGQ HHHHHCCCCCCEEECCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCHHHCCCEECCC RIVILTQFVKKN EEEEEEEHHHCC >Mature Secondary Structure TLESSLLARANSCCELCGASNALAVYPVPPESDGSAEQSVLLCETCQTQLDNPGNEDVN CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCC HWRCLNDSMWSQVPAVQVLAWRMLTRLQGEGWPQDLLDMLYLEDDTLAWAQATGEGQNEE CEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHH ARELHRDSNGAVLEAGDSVTLIKDLNVKGANFTAKRGTPVRNISLVQDNPEHIEGRVEGQ HHHHHCCCCCCEEECCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCHHHCCCEECCC RIVILTQFVKKN EEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA