Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
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Accession | NC_008260 |
Length | 3,120,143 |
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The map label for this gene is 110835118
Identifier: 110835118
GI number: 110835118
Start: 2577440
End: 2577814
Strand: Direct
Name: 110835118
Synonym: ABO_2258
Alternate gene names: NA
Gene position: 2577440-2577814 (Clockwise)
Preceding gene: 110835113
Following gene: 110835130
Centisome position: 82.61
GC content: 51.2
Gene sequence:
>375_bases ATGATGGAAGTTCTGAGAAAAAGAAGGGGTTTAGCATACCTGTTGCTAGTACTGCTGCAAGGTCTGCTGGCCGCCTGTGA CAACGCTCTACCAGAGCAGGCCATCAGCAAAGCACTGGCAGAGATAAAAAAGGGCATTGAAGAAGGCGACACCAGCACAA TAATGGGCCTAGTGGCCGATAACATTACCGTGGAGCGACGCGGGCGAACGCTGAGCCGCAAGGAAATTCAACGCACCCTA GTCGATTTTTTTCCGCTACCCAAACCGCAACATCTCATTCACACGCATCAATATTGCACTGGACCTGGTGACACAGGAGC AAGCACGCGTACAATTTACCGTGCTGCCCTGGGGTGGAAAAAATGTGTTTCCTGA
Upstream 100 bases:
>100_bases GCTGCCCTGTGGATTGCCGCTTTCCTCCACATACAGTTGATGCCCCTCGCCTACGGGAAGATAAAACTGCCGGTTAGCAT CCAAATAAGGGAATAACGCC
Downstream 100 bases:
>100_bases GGATGCCGAGAGCTACCAAATGGACAGTCACTGGCAGCTGAACGGCGGCTGGAAAATAAAAAACCTGAAGACCGGCACAT AATATGTGTCCGTTTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVADNITVERRGRTLSRKEIQRTL VDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWKKCVS
Sequences:
>Translated_124_residues MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVADNITVERRGRTLSRKEIQRTL VDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWKKCVS >Mature_124_residues MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVADNITVERRGRTLSRKEIQRTL VDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWKKCVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13746; Mature: 13746
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVAD CHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC NITVERRGRTLSRKEIQRTLVDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWK CCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH KCVS HHCC >Mature Secondary Structure MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVAD CHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC NITVERRGRTLSRKEIQRTLVDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWK CCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH KCVS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA