| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835085
Identifier: 110835085
GI number: 110835085
Start: 2538007
End: 2538702
Strand: Direct
Name: 110835085
Synonym: ABO_2224
Alternate gene names: NA
Gene position: 2538007-2538702 (Clockwise)
Preceding gene: 110835084
Following gene: 110835086
Centisome position: 81.34
GC content: 51.72
Gene sequence:
>696_bases ATGAAAATAATTAAAACTGCCGCGCTAGCCTTGTTGCTTGTTGCCTGCCAGAGCCAACATGATGAACGCCAAGGTGATTA CTACTTTTCACCGGCCGGCGCTTATATTCTTGACCTTGGCGTCAGCACGTTCCGTGGCGAAGTAGTGCTAGATGAACGCT GTGATCGTAACGGCGGCGCCACCACCTTCTGGGACGGCAGCGGCCGTCTGTTCCGCGTGGATTACCTGAAAGTAAACAAT CACCCTTCACGCGTGGACTCGGACCTGGCGCTGCTCAATTTGAGTCTCAACCGTTACCTGAGTGACGCTATCGCCAAAGC ACCGATGATTTCCGGCGCAGAAGCCTCCTACCAGGAATTTCTCGACGATGCGGATCGCAAAACACTGTTTGCCATCATCG ACATCAATGCGGATGCCGCTAAAGTAAAAGATGACGAGGAAGAAAGTGGTGCCTACTACAACGGTTTCCTGCTATTCAAG CAGGGCGAGTTAATCTATGTACTGCAGCATCGTCAACCCGTGCTGATGCCCGAAAAGATGAAAGCGATACTACTGAACCT TGCTGCCGGGATGGAAATTCCCGGTGAAGTGCGTGATGACACAGACATGGAAAAGCTTCATCGCTCGCTGAGAAAAATGA GTCCCAATGGCACTAATGGTAACCCGGTGCGTTTGTGCGAACCTGCGCAGAGCTAA
Upstream 100 bases:
>100_bases ATAACCATGAAACAACCTCTTCCTTTGGCAAGAAGCTAATCGCCGCACTATGCAGCCGGTGTGCTATGATCCATATGTTT TTTATGCTCGGGAGTAGACA
Downstream 100 bases:
>100_bases ATTGATAATAACGAATGGATCACTGACAATTCTGATGACGGAGTCTGTCATCCATTAGCCAAATTGGATTGATCGCCATG ACCACCTTAAAAACACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGATTFWDGSGRLFRVDYLKVNN HPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEFLDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFK QGELIYVLQHRQPVLMPEKMKAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS
Sequences:
>Translated_231_residues MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGATTFWDGSGRLFRVDYLKVNN HPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEFLDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFK QGELIYVLQHRQPVLMPEKMKAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS >Mature_231_residues MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGATTFWDGSGRLFRVDYLKVNN HPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEFLDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFK QGELIYVLQHRQPVLMPEKMKAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25692; Mature: 25692
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGA CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHCCCEEECCCCCCCCCC TTFWDGSGRLFRVDYLKVNNHPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEF CEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHH LDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFKQGELIYVLQHRQPVLMPEKM HCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHH KAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGA CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHCCCEEECCCCCCCCCC TTFWDGSGRLFRVDYLKVNNHPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEF CEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHH LDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFKQGELIYVLQHRQPVLMPEKM HCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHH KAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA