Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835085

Identifier: 110835085

GI number: 110835085

Start: 2538007

End: 2538702

Strand: Direct

Name: 110835085

Synonym: ABO_2224

Alternate gene names: NA

Gene position: 2538007-2538702 (Clockwise)

Preceding gene: 110835084

Following gene: 110835086

Centisome position: 81.34

GC content: 51.72

Gene sequence:

>696_bases
ATGAAAATAATTAAAACTGCCGCGCTAGCCTTGTTGCTTGTTGCCTGCCAGAGCCAACATGATGAACGCCAAGGTGATTA
CTACTTTTCACCGGCCGGCGCTTATATTCTTGACCTTGGCGTCAGCACGTTCCGTGGCGAAGTAGTGCTAGATGAACGCT
GTGATCGTAACGGCGGCGCCACCACCTTCTGGGACGGCAGCGGCCGTCTGTTCCGCGTGGATTACCTGAAAGTAAACAAT
CACCCTTCACGCGTGGACTCGGACCTGGCGCTGCTCAATTTGAGTCTCAACCGTTACCTGAGTGACGCTATCGCCAAAGC
ACCGATGATTTCCGGCGCAGAAGCCTCCTACCAGGAATTTCTCGACGATGCGGATCGCAAAACACTGTTTGCCATCATCG
ACATCAATGCGGATGCCGCTAAAGTAAAAGATGACGAGGAAGAAAGTGGTGCCTACTACAACGGTTTCCTGCTATTCAAG
CAGGGCGAGTTAATCTATGTACTGCAGCATCGTCAACCCGTGCTGATGCCCGAAAAGATGAAAGCGATACTACTGAACCT
TGCTGCCGGGATGGAAATTCCCGGTGAAGTGCGTGATGACACAGACATGGAAAAGCTTCATCGCTCGCTGAGAAAAATGA
GTCCCAATGGCACTAATGGTAACCCGGTGCGTTTGTGCGAACCTGCGCAGAGCTAA

Upstream 100 bases:

>100_bases
ATAACCATGAAACAACCTCTTCCTTTGGCAAGAAGCTAATCGCCGCACTATGCAGCCGGTGTGCTATGATCCATATGTTT
TTTATGCTCGGGAGTAGACA

Downstream 100 bases:

>100_bases
ATTGATAATAACGAATGGATCACTGACAATTCTGATGACGGAGTCTGTCATCCATTAGCCAAATTGGATTGATCGCCATG
ACCACCTTAAAAACACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGATTFWDGSGRLFRVDYLKVNN
HPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEFLDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFK
QGELIYVLQHRQPVLMPEKMKAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS

Sequences:

>Translated_231_residues
MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGATTFWDGSGRLFRVDYLKVNN
HPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEFLDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFK
QGELIYVLQHRQPVLMPEKMKAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS
>Mature_231_residues
MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGATTFWDGSGRLFRVDYLKVNN
HPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEFLDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFK
QGELIYVLQHRQPVLMPEKMKAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25692; Mature: 25692

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGA
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHCCCEEECCCCCCCCCC
TTFWDGSGRLFRVDYLKVNNHPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEF
CEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHH
LDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFKQGELIYVLQHRQPVLMPEKM
HCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHH
KAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MKIIKTAALALLLVACQSQHDERQGDYYFSPAGAYILDLGVSTFRGEVVLDERCDRNGGA
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHCCCEEECCCCCCCCCC
TTFWDGSGRLFRVDYLKVNNHPSRVDSDLALLNLSLNRYLSDAIAKAPMISGAEASYQEF
CEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHH
LDDADRKTLFAIIDINADAAKVKDDEEESGAYYNGFLLFKQGELIYVLQHRQPVLMPEKM
HCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHH
KAILLNLAAGMEIPGEVRDDTDMEKLHRSLRKMSPNGTNGNPVRLCEPAQS
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA