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The map label for this gene is rsgA

Identifier: 110835072

GI number: 110835072

Start: 2523844

End: 2524902

Strand: Direct

Name: rsgA

Synonym: ABO_2211

Alternate gene names: 110835072

Gene position: 2523844-2524902 (Clockwise)

Preceding gene: 110835070

Following gene: 110835073

Centisome position: 80.89

GC content: 58.73

Gene sequence:

>1059_bases
GTGGCCAAACGCAAACTCAATCGTCGCCAGCGCTGGCGCATCGAAAAGATCCAGGCGGAAAAACGCGACCGCGCCAACCG
CCGTACCGACCAGCAGGAGATTCTGGTAGCGGATGATCTAGGCGATGAGCAACACGGGGTCATCACCGCCCACTTCGGCC
AACAAGTGGAAGTGGAAAGTGCTGACGGCCCTGGCGCTGAAAATAGAACAACACGCCGCTGTCATTTCCGCGCCACCCTG
GAGCAGCTGGTGGTGGGTGACAAAGTGATCTGGCAACCGCCAAAAAGCGAGGGTCTGGGTGTTGTGGTGGCCATTGAGCC
CCGCGACACCGTGCTCAAGCGCCCGGACATGTACGGCAACCTGAAACCGGTGGCCGCAAACGTGGAACAAATGCTGGTGG
TATTCGCCCCACTGCCCACCCCCTCCAGCTCGCTGCTGGACCGTTATCTGGTGGCGGCGGAATTGTCCGGCATTGCCGCC
ACGCTAGTGCTCAATAAAGCCGATCTGATCGACGACACCCTACGCCCCTTTGTTGATGAACTGTCTGACATGTATCGCCA
CCTCGGCTACCCGGTTTTGGAAGTGTGCGCCCACCAACGTGAAGGTCTCACACCACTGCACGAAGCGTTGGCTGGCAAGA
CCAGCGTCTTTGTCGGGCAATCCGGGGTTGGCAAGTCCTCACTTATTAATGGCGTACTGCCAGAAGCTGACTTGCAGGTG
GGTGAACTCTCCAGCAACTCCGGCCTTGGCCAGCACACAACGGTTACCGCCCGGCTAGTCCACCTGCCCACCGGTGGCCA
GCTGATTGACTCCCCCGGGATTCGAGAATTTGGTCTCTGGCACATTGGTGAAGACGACTTGCTACACGGCTACCGGGAAC
TGTCCGAACTGGCAGGCTACTGTAAATTCCGTAATTGCTCACATCGCAACGAACCGGGTTGCGCCCTGATCCTCGCGGCG
CAGAACGGGGATATCGACGAAGAACGGCTGGCCAACTTCTACCAGATTTCTGACACCTTGAACGAGGATGGCCGCGAGCG
GTACTCAACCGACAGTTGA

Upstream 100 bases:

>100_bases
ATCTCTTTGCTACGCAGGGTGAAGGTCTGTTGATGCTTCATGGTAGCATGGCGCTATTCACATAACAGATCTCACACCCG
AACACAGGACCGCAAAACCC

Downstream 100 bases:

>100_bases
TCGCGGCCCACTCAGCCCCCACGGTATAAGAAAGACCCCGGATAATGGATAATGAAGGCATTGCCGATACGAAGGCGCAC
GCCTTCGTCAATAATCATCA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MAKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVESADGPGAENRTTRRCHFRATL
EQLVVGDKVIWQPPKSEGLGVVVAIEPRDTVLKRPDMYGNLKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAA
TLVLNKADLIDDTLRPFVDELSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLPEADLQV
GELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYRELSELAGYCKFRNCSHRNEPGCALILAA
QNGDIDEERLANFYQISDTLNEDGRERYSTDS

Sequences:

>Translated_352_residues
MAKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVESADGPGAENRTTRRCHFRATL
EQLVVGDKVIWQPPKSEGLGVVVAIEPRDTVLKRPDMYGNLKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAA
TLVLNKADLIDDTLRPFVDELSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLPEADLQV
GELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYRELSELAGYCKFRNCSHRNEPGCALILAA
QNGDIDEERLANFYQISDTLNEDGRERYSTDS
>Mature_351_residues
AKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVESADGPGAENRTTRRCHFRATLE
QLVVGDKVIWQPPKSEGLGVVVAIEPRDTVLKRPDMYGNLKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAAT
LVLNKADLIDDTLRPFVDELSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLPEADLQVG
ELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYRELSELAGYCKFRNCSHRNEPGCALILAAQ
NGDIDEERLANFYQISDTLNEDGRERYSTDS

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=346, Percent_Identity=43.6416184971098, Blast_Score=304, Evalue=5e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_ALCBS (Q0VMD9)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_693931.1
- ProteinModelPortal:   Q0VMD9
- SMR:   Q0VMD9
- STRING:   Q0VMD9
- GeneID:   4212527
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2211
- NMPDR:   fig|393595.12.peg.2210
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   FRDCKHL
- PhylomeDB:   Q0VMD9
- ProtClustDB:   PRK12288
- BioCyc:   ABOR393595:ABO_2211-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 38932; Mature: 38801

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVES
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCEEEEECCCEEEEEC
ADGPGAENRTTRRCHFRATLEQLVVGDKVIWQPPKSEGLGVVVAIEPRDTVLKRPDMYGN
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHHCCCCCCCC
LKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAATLVLNKADLIDDTLRPFVDE
CCHHHHCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHH
LSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLPEADLQV
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCEE
GELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYRELSELAGY
ECCCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
CKFRNCSHRNEPGCALILAAQNGDIDEERLANFYQISDTLNEDGRERYSTDS
HHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
AKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCEEEEECCCEEEEEC
ADGPGAENRTTRRCHFRATLEQLVVGDKVIWQPPKSEGLGVVVAIEPRDTVLKRPDMYGN
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHHCCCCCCCC
LKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAATLVLNKADLIDDTLRPFVDE
CCHHHHCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHH
LSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLPEADLQV
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCEE
GELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYRELSELAGY
ECCCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
CKFRNCSHRNEPGCALILAAQNGDIDEERLANFYQISDTLNEDGRERYSTDS
HHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA