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The map label for this gene is yjjK [C]

Identifier: 110835038

GI number: 110835038

Start: 2486334

End: 2488001

Strand: Direct

Name: yjjK [C]

Synonym: ABO_2177

Alternate gene names: 110835038

Gene position: 2486334-2488001 (Clockwise)

Preceding gene: 110835027

Following gene: 110835039

Centisome position: 79.69

GC content: 58.27

Gene sequence:

>1668_bases
ATGAGCCAGTACATCTTCACCATGGACAAGGTGGGCAAAGTTGTCCCGCCCAAGAAGCACATCCTGAAGAACATCTCCCT
GTCGTTTTTCCCCGGCGCCAAAATCGGCGTGCTGGGCCTGAACGGCTCCGGTAAGTCCACGCTGCTGCGCATCATGGCCG
GCGTTGACCAGGATTACCTGGGTGAGGCGCGGCCGCAGCCGGGCACCAACATCGGCTACCTGCCCCAGGAGCCGGAGCTG
GACCCGGAAAAAAATGTCCGCGAAATCGTGGAAGAAGCCGTGGCCGATATTCGTGACGCCCAGCAGCGCCTAGAAGAAGT
CTACGAAGCCTATGCCGCCGAAGATGCGGATTTCGACAAACTGGCCGCCGAGCAGGCCAAGCTGGAAGACATCATCGAAG
CCAGCGACGCCCATAACTTGGAGCGCAAGCTGGAGATCGCCGCCGACGCCCTGCGCCTGCCGCCCTGGGATGCCAGCGTG
CAAACCCTGTCCGGTGGCGAACGCCGCCGAGTGGCGTTGTGCCGGCTGGTGATGAGCGCACCAGATATGCTGTTGCTCGA
TGAGCCCACTAACCACCTGGATGCGGAATCCGTGGCCTGGCTGGAGCGTTTCCTGCACGAATTCCCCGGCACCGTGGTGG
CGGTAACCCACGATCGCTACTTCCTCGATAATTCCTGCGAGTGGATTCTTGAACTGGATCGCGGCGAAGGCATTCCTTGG
CAAGGCAACTACTCCTCTTGGCTGGAACAGAAAGAACAGCGCCTGGAGCAGGAAGCGAAAAGCGAATCGGCCCACCGTAA
AACAGTGGAAAAGGAACTGGAATGGGTACGTCAGAACCCGAAAGGCCGCCGCGCCAAGAACAAGGCCCGTGTCTCCGCCT
TTGAAGAACTGGCCAGCCAGGAATTCCAGAAGCGCAACGAAACCCAAGAGCTTTATATTCCGCCGGGCGAGCGCTTGGGC
GAACAGGTTTTCGAAATCAAAAACGTGGCCAAGCAGTTCGACCACAAGCTGCTATACGAAGACTTGGACTTCCAAATTCC
TCGCGGGGCCATCGTTGGTATTATCGGCCCCAACGGTGCGGGTAAAACCACCCTATTCCGCATGTTGGCAGGCCAGGAAA
CCCCGGACAGCGGTGAAATCATCACCGGCGACACCGTACAGATGGCCTACGTGGACCAGAGCCGCGAAGACCTGGATAGC
AACAAGAGCGTCTGGGAAGAAGTCTCCGACGGCAATGACATCCTGCGCATAGGTAATTATGAAGTGCCCAGCCGCGCCTA
CTTGGGCCGGTTCAATTTCAAAGGTGGCGATCAACAGAAGCGTGTCGGCGACCTCTCCGGTGGTGAACGTAACCGTCTGC
ACCTCGCGAAATTACTTAAACAGGGCGCCAACGTATTGCTGCTCGATGAGCCGACCAACGACCTGGACGTGGAAACCCTG
CGGGCACTGGAAGAAGCTCTGCTGGCCTTCCCTGGCTGCGCCATCGTCATTTCCCACGATCGCTGGTTTCTGGATCGGGT
CGCCACTCATATCCTCTCCTTCGAGGGCGATGCCCGGGTAGAGTGGTTCGAGGGCTCTTACACCGAGTATGAAGAATACA
AGCGCAAGCAGTTCGGTGATGCAGCCCTGCAACCCAAGCGGATGAAATACAAGCGAATCGAAGTCTGA

Upstream 100 bases:

>100_bases
GCTTTCCGTTAGCTTAGGCGCCAATCCAAGAACCCCTGCCGGGGCCTGCAGCCAACCTGCATCGAGCCTCGCACATTGAT
ACAGACTGCGGTCGGAGTTT

Downstream 100 bases:

>100_bases
TTCGCACGCCACAATACCGGGGAAAGGCATGCCGGTATCGGGGCGCAACAGGGGTGACAACATGAACGAAAGACGACGGG
CCAACCGGGTGGACTTCGAC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MSQYIFTMDKVGKVVPPKKHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDQDYLGEARPQPGTNIGYLPQEPEL
DPEKNVREIVEEAVADIRDAQQRLEEVYEAYAAEDADFDKLAAEQAKLEDIIEASDAHNLERKLEIAADALRLPPWDASV
QTLSGGERRRVALCRLVMSAPDMLLLDEPTNHLDAESVAWLERFLHEFPGTVVAVTHDRYFLDNSCEWILELDRGEGIPW
QGNYSSWLEQKEQRLEQEAKSESAHRKTVEKELEWVRQNPKGRRAKNKARVSAFEELASQEFQKRNETQELYIPPGERLG
EQVFEIKNVAKQFDHKLLYEDLDFQIPRGAIVGIIGPNGAGKTTLFRMLAGQETPDSGEIITGDTVQMAYVDQSREDLDS
NKSVWEEVSDGNDILRIGNYEVPSRAYLGRFNFKGGDQQKRVGDLSGGERNRLHLAKLLKQGANVLLLDEPTNDLDVETL
RALEEALLAFPGCAIVISHDRWFLDRVATHILSFEGDARVEWFEGSYTEYEEYKRKQFGDAALQPKRMKYKRIEV

Sequences:

>Translated_555_residues
MSQYIFTMDKVGKVVPPKKHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDQDYLGEARPQPGTNIGYLPQEPEL
DPEKNVREIVEEAVADIRDAQQRLEEVYEAYAAEDADFDKLAAEQAKLEDIIEASDAHNLERKLEIAADALRLPPWDASV
QTLSGGERRRVALCRLVMSAPDMLLLDEPTNHLDAESVAWLERFLHEFPGTVVAVTHDRYFLDNSCEWILELDRGEGIPW
QGNYSSWLEQKEQRLEQEAKSESAHRKTVEKELEWVRQNPKGRRAKNKARVSAFEELASQEFQKRNETQELYIPPGERLG
EQVFEIKNVAKQFDHKLLYEDLDFQIPRGAIVGIIGPNGAGKTTLFRMLAGQETPDSGEIITGDTVQMAYVDQSREDLDS
NKSVWEEVSDGNDILRIGNYEVPSRAYLGRFNFKGGDQQKRVGDLSGGERNRLHLAKLLKQGANVLLLDEPTNDLDVETL
RALEEALLAFPGCAIVISHDRWFLDRVATHILSFEGDARVEWFEGSYTEYEEYKRKQFGDAALQPKRMKYKRIEV
>Mature_554_residues
SQYIFTMDKVGKVVPPKKHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDQDYLGEARPQPGTNIGYLPQEPELD
PEKNVREIVEEAVADIRDAQQRLEEVYEAYAAEDADFDKLAAEQAKLEDIIEASDAHNLERKLEIAADALRLPPWDASVQ
TLSGGERRRVALCRLVMSAPDMLLLDEPTNHLDAESVAWLERFLHEFPGTVVAVTHDRYFLDNSCEWILELDRGEGIPWQ
GNYSSWLEQKEQRLEQEAKSESAHRKTVEKELEWVRQNPKGRRAKNKARVSAFEELASQEFQKRNETQELYIPPGERLGE
QVFEIKNVAKQFDHKLLYEDLDFQIPRGAIVGIIGPNGAGKTTLFRMLAGQETPDSGEIITGDTVQMAYVDQSREDLDSN
KSVWEEVSDGNDILRIGNYEVPSRAYLGRFNFKGGDQQKRVGDLSGGERNRLHLAKLLKQGANVLLLDEPTNDLDVETLR
ALEEALLAFPGCAIVISHDRWFLDRVATHILSFEGDARVEWFEGSYTEYEEYKRKQFGDAALQPKRMKYKRIEV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=517, Percent_Identity=28.2398452611219, Blast_Score=192, Evalue=1e-48,
Organism=Homo sapiens, GI10947137, Length=542, Percent_Identity=28.7822878228782, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI27881506, Length=542, Percent_Identity=28.7822878228782, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI69354671, Length=557, Percent_Identity=28.0071813285458, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI10947135, Length=557, Percent_Identity=28.0071813285458, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI31657092, Length=203, Percent_Identity=28.0788177339901, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=72.1518987341772, Blast_Score=850, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=512, Percent_Identity=35.3515625, Blast_Score=295, Evalue=7e-81,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=30.8429118773946, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI1789751, Length=524, Percent_Identity=32.0610687022901, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI87081782, Length=535, Percent_Identity=23.5514018691589, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=30.2083333333333, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI48994943, Length=474, Percent_Identity=24.0506329113924, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=26.530612244898, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787164, Length=184, Percent_Identity=28.804347826087, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=165, Percent_Identity=31.5151515151515, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1786345, Length=185, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1789891, Length=246, Percent_Identity=23.9837398373984, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=170, Percent_Identity=31.1764705882353, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=29.2035398230088, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788897, Length=188, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=28.643216080402, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787029, Length=244, Percent_Identity=28.6885245901639, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081834, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787089, Length=236, Percent_Identity=27.9661016949153, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=27.6041666666667, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=538, Percent_Identity=28.2527881040892, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17559834, Length=557, Percent_Identity=25.673249551167, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=30.0934579439252, Blast_Score=182, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=28.8389513108614, Blast_Score=200, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6321121, Length=565, Percent_Identity=27.4336283185841, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6323278, Length=380, Percent_Identity=27.3684210526316, Blast_Score=127, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=379, Percent_Identity=27.1767810026385, Blast_Score=119, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=26.5625, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6320266, Length=497, Percent_Identity=20.523138832998, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24666836, Length=536, Percent_Identity=31.3432835820896, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24642252, Length=542, Percent_Identity=28.0442804428044, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI18859989, Length=542, Percent_Identity=28.0442804428044, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=30.2583025830258, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI28574259, Length=181, Percent_Identity=30.3867403314917, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666092, Length=188, Percent_Identity=32.4468085106383, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45552437, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24585557, Length=219, Percent_Identity=28.310502283105, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62920; Mature: 62788

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYIFTMDKVGKVVPPKKHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDQDYL
CCCEEEEHHHCCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCHHHH
GEARPQPGTNIGYLPQEPELDPEKNVREIVEEAVADIRDAQQRLEEVYEAYAAEDADFDK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LAAEQAKLEDIIEASDAHNLERKLEIAADALRLPPWDASVQTLSGGERRRVALCRLVMSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLHEFPGTVVAVTHDRYFLDNSCEWILELDRGEGIPW
CCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCEEEEEECCCCCCCC
QGNYSSWLEQKEQRLEQEAKSESAHRKTVEKELEWVRQNPKGRRAKNKARVSAFEELASQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EFQKRNETQELYIPPGERLGEQVFEIKNVAKQFDHKLLYEDLDFQIPRGAIVGIIGPNGA
HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
GKTTLFRMLAGQETPDSGEIITGDTVQMAYVDQSREDLDSNKSVWEEVSDGNDILRIGNY
CHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCHHHHCCCHHHHHHHCCCCCEEEECCC
EVPSRAYLGRFNFKGGDQQKRVGDLSGGERNRLHLAKLLKQGANVLLLDEPTNDLDVETL
CCCCHHHEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLAFPGCAIVISHDRWFLDRVATHILSFEGDARVEWFEGSYTEYEEYKRKQFGD
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC
AALQPKRMKYKRIEV
HHCCCHHHCHHHCCC
>Mature Secondary Structure 
SQYIFTMDKVGKVVPPKKHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDQDYL
CCEEEEHHHCCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCHHHH
GEARPQPGTNIGYLPQEPELDPEKNVREIVEEAVADIRDAQQRLEEVYEAYAAEDADFDK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LAAEQAKLEDIIEASDAHNLERKLEIAADALRLPPWDASVQTLSGGERRRVALCRLVMSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLHEFPGTVVAVTHDRYFLDNSCEWILELDRGEGIPW
CCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCEEEEEECCCCCCCC
QGNYSSWLEQKEQRLEQEAKSESAHRKTVEKELEWVRQNPKGRRAKNKARVSAFEELASQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EFQKRNETQELYIPPGERLGEQVFEIKNVAKQFDHKLLYEDLDFQIPRGAIVGIIGPNGA
HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
GKTTLFRMLAGQETPDSGEIITGDTVQMAYVDQSREDLDSNKSVWEEVSDGNDILRIGNY
CHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCHHHHCCCHHHHHHHCCCCCEEEECCC
EVPSRAYLGRFNFKGGDQQKRVGDLSGGERNRLHLAKLLKQGANVLLLDEPTNDLDVETL
CCCCHHHEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLAFPGCAIVISHDRWFLDRVATHILSFEGDARVEWFEGSYTEYEEYKRKQFGD
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC
AALQPKRMKYKRIEV
HHCCCHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]