Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835024

Identifier: 110835024

GI number: 110835024

Start: 2472183

End: 2473250

Strand: Direct

Name: 110835024

Synonym: ABO_2163

Alternate gene names: NA

Gene position: 2472183-2473250 (Clockwise)

Preceding gene: 110835022

Following gene: 110835025

Centisome position: 79.23

GC content: 53.65

Gene sequence:

>1068_bases
ATGAAACAGCAACGCATTTTGCCACTATCAACAACATTGCTGGCGGGACTTACCGCCCTGCCCGCCCATGCTGAACTGGA
AGTCACCCCGTACGGCTCTCTGCGTATTCAAACAGAGGCCGTATTTGTGGATCAGGCGCAGCCCGGTGAAGACGACTCTT
ATACCGGGCTAAGGGATGCGTATTCTCGATTGGGTGTCACCGCCAACTACAATGATTTCGAACACTTCGATATTTCTGCG
ACGGTAGAGTTCCCCATTAACTCCGCACGGCTGCGAGCGGAAGATCCGACTTTTTTCCATGAACTTTATAAAGAAGACAA
TAACAGCATGCCGCGAGTTGCCGATATTACTGTCTCCAACGACCGTTACGGCAGTCTACGCGTCGGCACCCAATGGCTGG
CCTATTACAACACCGTGGCTTACCCTCTGGATTTCTTCAGTTCCTTCTACTCCGGTTACGCAACCCAGGCCAGCTTCCGC
CGTGACGCTATAACCTACACCACCCCCAGCATGGGCGGCCTCACCGCCACCATTTCCGGAGTCGACCTAACCGACGAGCA
AGGCACCAGCTATCTAGACACCATACAATATGCCCTCTCTTACGCGGTCAACGATGATTTGGCATTCGGTATTGGTTATC
AGGATAGTGAACAGGATTCCGCCAAGCATGCCGACCAGGCTGGCATCTCCGCCGCTTGGGCCCCCGGCAACTGGCGTTTC
GCCGCCAAAGTGGAACAACTGCTAACCAATAACAACACGGTCCAAGATGACGACCCGCTAACCTACAACCTGATGGGCTC
CTACAGCTGGGCCAAATACACCCTACGCGCTATGGTCGCCCATGGTGAAGAAACCGACGAAGGCGATGCATTTTTCCAAG
GCGATTCTGCCCAGATTGGGCTGGACTACCGCCATACAGAAAACCTGAAGTTCTTCGCTGAATACTTCTATGAAGAGCTC
GGCTACGCCATCTACACGCCCAACTCCGATAGCTTCAACCCGCTGGCGGGCTACCATGCAGAAAGCGATGGTCAAGTCCT
CACCGTCGGTATGCGCTTTGATTTTTAA

Upstream 100 bases:

>100_bases
AACGAGGCGCAATATCCGCCGGCCCTGCAATTTACAGGCTAGGCGCCTCGTCACTCGCTAGGCTGCGCTTTTTTCAGATC
AACCGTCGAGGGAGAAACCG

Downstream 100 bases:

>100_bases
GCGCCGCAAGTCGGCATCATGTTGCATACAACAACACGATATAAGGTGGCAATGAACAACACACCAGCAGGCCGCACCCA
GCCCTTGGACGTGGACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Insertion C-Terminal Signal Domain Protein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDAYSRLGVTANYNDFEHFDISA
TVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSNDRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFR
RDAITYTTPSMGGLTATISGVDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF
AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIGLDYRHTENLKFFAEYFYEEL
GYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF

Sequences:

>Translated_355_residues
MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDAYSRLGVTANYNDFEHFDISA
TVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSNDRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFR
RDAITYTTPSMGGLTATISGVDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF
AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIGLDYRHTENLKFFAEYFYEEL
GYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF
>Mature_355_residues
MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDAYSRLGVTANYNDFEHFDISA
TVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSNDRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFR
RDAITYTTPSMGGLTATISGVDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF
AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIGLDYRHTENLKFFAEYFYEEL
GYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39609; Mature: 39609

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDA
CCCCEECCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHH
YSRLGVTANYNDFEHFDISATVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSN
HHHCCCEECCCCCEEEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCCCCCEEEEEEECC
DRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFRRDAITYTTPSMGGLTATISG
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCEEEEEEC
VDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCH
AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIG
HHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
LDYRHTENLKFFAEYFYEELGYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF
EEEEECCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDA
CCCCEECCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHH
YSRLGVTANYNDFEHFDISATVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSN
HHHCCCEECCCCCEEEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCCCCCEEEEEEECC
DRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFRRDAITYTTPSMGGLTATISG
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCEEEEEEC
VDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCH
AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIG
HHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
LDYRHTENLKFFAEYFYEELGYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF
EEEEECCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA