| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835024
Identifier: 110835024
GI number: 110835024
Start: 2472183
End: 2473250
Strand: Direct
Name: 110835024
Synonym: ABO_2163
Alternate gene names: NA
Gene position: 2472183-2473250 (Clockwise)
Preceding gene: 110835022
Following gene: 110835025
Centisome position: 79.23
GC content: 53.65
Gene sequence:
>1068_bases ATGAAACAGCAACGCATTTTGCCACTATCAACAACATTGCTGGCGGGACTTACCGCCCTGCCCGCCCATGCTGAACTGGA AGTCACCCCGTACGGCTCTCTGCGTATTCAAACAGAGGCCGTATTTGTGGATCAGGCGCAGCCCGGTGAAGACGACTCTT ATACCGGGCTAAGGGATGCGTATTCTCGATTGGGTGTCACCGCCAACTACAATGATTTCGAACACTTCGATATTTCTGCG ACGGTAGAGTTCCCCATTAACTCCGCACGGCTGCGAGCGGAAGATCCGACTTTTTTCCATGAACTTTATAAAGAAGACAA TAACAGCATGCCGCGAGTTGCCGATATTACTGTCTCCAACGACCGTTACGGCAGTCTACGCGTCGGCACCCAATGGCTGG CCTATTACAACACCGTGGCTTACCCTCTGGATTTCTTCAGTTCCTTCTACTCCGGTTACGCAACCCAGGCCAGCTTCCGC CGTGACGCTATAACCTACACCACCCCCAGCATGGGCGGCCTCACCGCCACCATTTCCGGAGTCGACCTAACCGACGAGCA AGGCACCAGCTATCTAGACACCATACAATATGCCCTCTCTTACGCGGTCAACGATGATTTGGCATTCGGTATTGGTTATC AGGATAGTGAACAGGATTCCGCCAAGCATGCCGACCAGGCTGGCATCTCCGCCGCTTGGGCCCCCGGCAACTGGCGTTTC GCCGCCAAAGTGGAACAACTGCTAACCAATAACAACACGGTCCAAGATGACGACCCGCTAACCTACAACCTGATGGGCTC CTACAGCTGGGCCAAATACACCCTACGCGCTATGGTCGCCCATGGTGAAGAAACCGACGAAGGCGATGCATTTTTCCAAG GCGATTCTGCCCAGATTGGGCTGGACTACCGCCATACAGAAAACCTGAAGTTCTTCGCTGAATACTTCTATGAAGAGCTC GGCTACGCCATCTACACGCCCAACTCCGATAGCTTCAACCCGCTGGCGGGCTACCATGCAGAAAGCGATGGTCAAGTCCT CACCGTCGGTATGCGCTTTGATTTTTAA
Upstream 100 bases:
>100_bases AACGAGGCGCAATATCCGCCGGCCCTGCAATTTACAGGCTAGGCGCCTCGTCACTCGCTAGGCTGCGCTTTTTTCAGATC AACCGTCGAGGGAGAAACCG
Downstream 100 bases:
>100_bases GCGCCGCAAGTCGGCATCATGTTGCATACAACAACACGATATAAGGTGGCAATGAACAACACACCAGCAGGCCGCACCCA GCCCTTGGACGTGGACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Insertion C-Terminal Signal Domain Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDAYSRLGVTANYNDFEHFDISA TVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSNDRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFR RDAITYTTPSMGGLTATISGVDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIGLDYRHTENLKFFAEYFYEEL GYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF
Sequences:
>Translated_355_residues MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDAYSRLGVTANYNDFEHFDISA TVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSNDRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFR RDAITYTTPSMGGLTATISGVDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIGLDYRHTENLKFFAEYFYEEL GYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF >Mature_355_residues MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDAYSRLGVTANYNDFEHFDISA TVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSNDRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFR RDAITYTTPSMGGLTATISGVDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIGLDYRHTENLKFFAEYFYEEL GYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39609; Mature: 39609
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDA CCCCEECCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHH YSRLGVTANYNDFEHFDISATVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSN HHHCCCEECCCCCEEEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCCCCCEEEEEEECC DRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFRRDAITYTTPSMGGLTATISG CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCEEEEEEC VDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCH AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIG HHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE LDYRHTENLKFFAEYFYEELGYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF EEEEECCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKQQRILPLSTTLLAGLTALPAHAELEVTPYGSLRIQTEAVFVDQAQPGEDDSYTGLRDA CCCCEECCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHH YSRLGVTANYNDFEHFDISATVEFPINSARLRAEDPTFFHELYKEDNNSMPRVADITVSN HHHCCCEECCCCCEEEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCCCCCEEEEEEECC DRYGSLRVGTQWLAYYNTVAYPLDFFSSFYSGYATQASFRRDAITYTTPSMGGLTATISG CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCEEEEEEC VDLTDEQGTSYLDTIQYALSYAVNDDLAFGIGYQDSEQDSAKHADQAGISAAWAPGNWRF CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCH AAKVEQLLTNNNTVQDDDPLTYNLMGSYSWAKYTLRAMVAHGEETDEGDAFFQGDSAQIG HHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE LDYRHTENLKFFAEYFYEELGYAIYTPNSDSFNPLAGYHAESDGQVLTVGMRFDF EEEEECCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA