Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 110834998

GI number: 110834998

Start: 2441154

End: 2441708

Strand: Direct

Name: yidD [C]

Synonym: ABO_2137

Alternate gene names: 110834998

Gene position: 2441154-2441708 (Clockwise)

Preceding gene: 110834996

Following gene: 110834999

Centisome position: 78.24

GC content: 55.5

Gene sequence:

>555_bases
ATGTTAAAAGTGTGCCCACCTATCGAAAAAGCGCAACAATGTGTTCGAGTCAGCCAAGAAAACCTCGATAGCCCGGCCGA
TCACTTTTCTCATGGGCTTCCCTACCTTGGTACTGAGGTTACGTGCTTTGCCTATATCATCATTATAGCGCAGCACTTTC
TTATCACCCTGCCTGTTAGCGCCATGGAACAGCGCTGGTATATGCGTACCCGATGCCTTTATCATGCTCTTTTACAACTA
ATGACAGGCAGCGCTGTTCCCGTGAAATCGCTTCTGCTTGGCGCCATCTGGCTGTACCAGAAGGTGTTGAGCCCTTGGAT
AGGCAACCAATGCCGCTTCTACCCCACCTGCTCGGAATACGCACGGCAGGCGGTAGAGACCCATGGCAGCCTGCGCGGCA
GCGCACTGGCAGCGAAACGGCTGTGCAAGTGCCACCCTTGGCACCCAGGCGGTTTTGACTATGTGCCTGGCGCCGTGCCT
GGCGCCGAGCCTGACCAGGAACAGCATCAGTGCACCCCGCTATGCAACCACCACAGCGAGGATCACTCACAGTGA

Upstream 100 bases:

>100_bases
AAAGGCTAGGAAAATAAGCACAGGCTTCCTTTTACCTTTAATCTACTACTGAACGCTCCTTGCGTACTCAGCCCCCAGAC
GCGCTCGGAATCTAGACGCC

Downstream 100 bases:

>100_bases
TCGCGGCCATGCTGAGCCCATACCGTCGCGGGCACTCTTTGCCGCTGGTTTTACCGCTGGTTGTCGGGCTGTTTCTTGTC
CAATTAATACTGGCATGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLKVCPPIEKAQQCVRVSQENLDSPADHFSHGLPYLGTEVTCFAYIIIIAQHFLITLPVSAMEQRWYMRTRCLYHALLQL
MTGSAVPVKSLLLGAIWLYQKVLSPWIGNQCRFYPTCSEYARQAVETHGSLRGSALAAKRLCKCHPWHPGGFDYVPGAVP
GAEPDQEQHQCTPLCNHHSEDHSQ

Sequences:

>Translated_184_residues
MLKVCPPIEKAQQCVRVSQENLDSPADHFSHGLPYLGTEVTCFAYIIIIAQHFLITLPVSAMEQRWYMRTRCLYHALLQL
MTGSAVPVKSLLLGAIWLYQKVLSPWIGNQCRFYPTCSEYARQAVETHGSLRGSALAAKRLCKCHPWHPGGFDYVPGAVP
GAEPDQEQHQCTPLCNHHSEDHSQ
>Mature_184_residues
MLKVCPPIEKAQQCVRVSQENLDSPADHFSHGLPYLGTEVTCFAYIIIIAQHFLITLPVSAMEQRWYMRTRCLYHALLQL
MTGSAVPVKSLLLGAIWLYQKVLSPWIGNQCRFYPTCSEYARQAVETHGSLRGSALAAKRLCKCHPWHPGGFDYVPGAVP
GAEPDQEQHQCTPLCNHHSEDHSQ

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family [H]

Homologues:

Organism=Escherichia coli, GI87082322, Length=70, Percent_Identity=48.5714285714286, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002696
- ProDom:   PD004225 [H]

Pfam domain/function: PF01809 DUF37 [H]

EC number: NA

Molecular weight: Translated: 20686; Mature: 20686

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVCPPIEKAQQCVRVSQENLDSPADHFSHGLPYLGTEVTCFAYIIIIAQHFLITLPVS
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
AMEQRWYMRTRCLYHALLQLMTGSAVPVKSLLLGAIWLYQKVLSPWIGNQCRFYPTCSEY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHH
ARQAVETHGSLRGSALAAKRLCKCHPWHPGGFDYVPGAVPGAEPDQEQHQCTPLCNHHSE
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCC
DHSQ
CCCC
>Mature Secondary Structure
MLKVCPPIEKAQQCVRVSQENLDSPADHFSHGLPYLGTEVTCFAYIIIIAQHFLITLPVS
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
AMEQRWYMRTRCLYHALLQLMTGSAVPVKSLLLGAIWLYQKVLSPWIGNQCRFYPTCSEY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHH
ARQAVETHGSLRGSALAAKRLCKCHPWHPGGFDYVPGAVPGAEPDQEQHQCTPLCNHHSE
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCC
DHSQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA