| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834989
Identifier: 110834989
GI number: 110834989
Start: 2430770
End: 2431183
Strand: Direct
Name: 110834989
Synonym: ABO_2128
Alternate gene names: NA
Gene position: 2430770-2431183 (Clockwise)
Preceding gene: 110834988
Following gene: 110834990
Centisome position: 77.91
GC content: 54.35
Gene sequence:
>414_bases ATGAGTAATAGCAAAACACTGACCTTTGCATTCATGGATCCACCGTTCGAGAGTGAACGCACGGTAACATTTTTTCGACT GCTGGACGCCGCGCTGGAAAAAAACGCTAACGTTCGCGTGTTTGCCTACGAAGGTGCTGTCGCTCTGTCTTTTTCCAAAC AAGCCCCCCATGGCAACGCCGTACACGGCCTCAACCGTGAAGAAGAATCCCTCCCGCTGAGTAAAGATTGGGTTGCCGCC TTGCAACAAAAAGCCACTGACAAAGGGCTGACCTTCGAGTGGATCAACTGTGGGCTGTGTGTAGACGAACGCGGCGTTAA CGACGTGATCGACGGCTGCGGGCGAGGCGGCCCACCGGATTTATGGCGCTACGCCAGCAAGGCCTTCAACACTCTCACCA TTGGCACGAGGTAA
Upstream 100 bases:
>100_bases GGACCTGAAAGAAAACATTGCCAGCAGCAGTCTCGACACCGTTATCGACGCCCTGCTCGACGGCGAAAAAGTCATCTGGA ATTGAGTCATTGGAGTCATC
Downstream 100 bases:
>100_bases GCCATGAAAGCCCTACAAGTTATTGATCAGGCATTTCGTACCACTACCGAAGAGCAGGACGACACCATTCTCTGGCTTAC CCAATCCATGCGCGGTGCCG
Product: iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSNSKTLTFAFMDPPFESERTVTFFRLLDAALEKNANVRVFAYEGAVALSFSKQAPHGNAVHGLNREEESLPLSKDWVAA LQQKATDKGLTFEWINCGLCVDERGVNDVIDGCGRGGPPDLWRYASKAFNTLTIGTR
Sequences:
>Translated_137_residues MSNSKTLTFAFMDPPFESERTVTFFRLLDAALEKNANVRVFAYEGAVALSFSKQAPHGNAVHGLNREEESLPLSKDWVAA LQQKATDKGLTFEWINCGLCVDERGVNDVIDGCGRGGPPDLWRYASKAFNTLTIGTR >Mature_136_residues SNSKTLTFAFMDPPFESERTVTFFRLLDAALEKNANVRVFAYEGAVALSFSKQAPHGNAVHGLNREEESLPLSKDWVAAL QQKATDKGLTFEWINCGLCVDERGVNDVIDGCGRGGPPDLWRYASKAFNTLTIGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15115; Mature: 14984
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSKTLTFAFMDPPFESERTVTFFRLLDAALEKNANVRVFAYEGAVALSFSKQAPHGNA CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCC VHGLNREEESLPLSKDWVAALQQKATDKGLTFEWINCGLCVDERGVNDVIDGCGRGGPPD CCCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCHHHHHHCCCCCCHH LWRYASKAFNTLTIGTR HHHHHHHHCCEEEECCC >Mature Secondary Structure SNSKTLTFAFMDPPFESERTVTFFRLLDAALEKNANVRVFAYEGAVALSFSKQAPHGNA CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCC VHGLNREEESLPLSKDWVAALQQKATDKGLTFEWINCGLCVDERGVNDVIDGCGRGGPPD CCCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCHHHHHHCCCCCCHH LWRYASKAFNTLTIGTR HHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA