| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834988
Identifier: 110834988
GI number: 110834988
Start: 2430428
End: 2430754
Strand: Direct
Name: 110834988
Synonym: ABO_2127
Alternate gene names: NA
Gene position: 2430428-2430754 (Clockwise)
Preceding gene: 110834987
Following gene: 110834989
Centisome position: 77.89
GC content: 54.13
Gene sequence:
>327_bases ATGTCCGATTACTTGTTTATCCAAAGCCAGGACCCGTTCACCGAGGTCCGCACCGAGCACCAGTTCGCCCTTGCCGGCCA ACTCTACGATGCCGGGCATAACGTGCGCCTGCTACTGGTACAAAACGGGGTAACCCCGGCCCACAAAGGCGCGCGCAGTG TGCATTTCGACAAGCTATTGAAATGGGGCGTACCGGTGCTGGCCGATAATTTTTCTCTGAAACAACGGCAAATATTGGAG AAGGACCTGAAAGAAAACATTGCCAGCAGCAGTCTCGACACCGTTATCGACGCCCTGCTCGACGGCGAAAAAGTCATCTG GAATTGA
Upstream 100 bases:
>100_bases AGTCAGCAACTCGATTGCGAACGTGATAACACCCCACTCAATAACAACCCGGCAGATGCGCACCCCATTGCCCTCCAGCC CCATTGAATCAGGAGTGACC
Downstream 100 bases:
>100_bases GTCATTGGAGTCATCATGAGTAATAGCAAAACACTGACCTTTGCATTCATGGATCCACCGTTCGAGAGTGAACGCACGGT AACATTTTTTCGACTGCTGG
Product: DsrE/DsrF family oxidoreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSDYLFIQSQDPFTEVRTEHQFALAGQLYDAGHNVRLLLVQNGVTPAHKGARSVHFDKLLKWGVPVLADNFSLKQRQILE KDLKENIASSSLDTVIDALLDGEKVIWN
Sequences:
>Translated_108_residues MSDYLFIQSQDPFTEVRTEHQFALAGQLYDAGHNVRLLLVQNGVTPAHKGARSVHFDKLLKWGVPVLADNFSLKQRQILE KDLKENIASSSLDTVIDALLDGEKVIWN >Mature_107_residues SDYLFIQSQDPFTEVRTEHQFALAGQLYDAGHNVRLLLVQNGVTPAHKGARSVHFDKLLKWGVPVLADNFSLKQRQILEK DLKENIASSSLDTVIDALLDGEKVIWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12175; Mature: 12044
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYLFIQSQDPFTEVRTEHQFALAGQLYDAGHNVRLLLVQNGVTPAHKGARSVHFDKLL CCCEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH KWGVPVLADNFSLKQRQILEKDLKENIASSSLDTVIDALLDGEKVIWN HCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCC >Mature Secondary Structure SDYLFIQSQDPFTEVRTEHQFALAGQLYDAGHNVRLLLVQNGVTPAHKGARSVHFDKLL CCEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH KWGVPVLADNFSLKQRQILEKDLKENIASSSLDTVIDALLDGEKVIWN HCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA