Click here to switch to the map view.

The map label for this gene is nsrR [H]

Identifier: 110834981

GI number: 110834981

Start: 2426070

End: 2426501

Strand: Direct

Name: nsrR [H]

Synonym: ABO_2120

Alternate gene names: 110834981

Gene position: 2426070-2426501 (Clockwise)

Preceding gene: 110834979

Following gene: 110834985

Centisome position: 77.76

GC content: 50.46

Gene sequence:

>432_bases
ATGCAACTCACAACACATACGGACTACGCCCTGCGGACTCTCATTTACCTCTCCCTACGGCATGACAAGCTCCCAACCAC
CATCCAGGAAATCGCCGATGCGTACCACATCTCCAACAACCACGTAGCCAAGGTTGCACAGACACTGGTACAACTGGGTT
ATGTGCAGAGTTTAAGAGGCAGGAGCGGCGGCTTGGTAATGGCCAAACCTGCAAACGAGATAAACGTGGGGGAGCTGATA
CGGCAGACAGAAAACCTCAAACTACTGGACTGTTTTGGCACAGAATCGTCTTGCCCAATAGACCCTGCCTGCAAGCTGAA
AAACGCACTAGGCAAAGCCCAAGCCGCCTTTCTTCAGACTCTAGATCAATACAACTTGGCAGACTTCACCGATAATAGCG
ATGAGCTTCGCATCCTGCTCAAACAAGTTTAA

Upstream 100 bases:

>100_bases
GGGTAAGCATGGCGTGACTCCTGTTGGCGACCAATAATAGGCATTTTACATGCCTCTTTTAAATGGGCATATTAGATACT
CATTTTTTGGAGGTCAAGCC

Downstream 100 bases:

>100_bases
AGCAGGGCACTCAAGGCGCCCTGTCGCCATTATTTATTGGCTCTTTTTTCTCGTCGTTTCTCTTTTAGAGTTTTTTGCGG
TTTTTTCTTCGTTTTTTCTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQLTTHTDYALRTLIYLSLRHDKLPTTIQEIADAYHISNNHVAKVAQTLVQLGYVQSLRGRSGGLVMAKPANEINVGELI
RQTENLKLLDCFGTESSCPIDPACKLKNALGKAQAAFLQTLDQYNLADFTDNSDELRILLKQV

Sequences:

>Translated_143_residues
MQLTTHTDYALRTLIYLSLRHDKLPTTIQEIADAYHISNNHVAKVAQTLVQLGYVQSLRGRSGGLVMAKPANEINVGELI
RQTENLKLLDCFGTESSCPIDPACKLKNALGKAQAAFLQTLDQYNLADFTDNSDELRILLKQV
>Mature_143_residues
MQLTTHTDYALRTLIYLSLRHDKLPTTIQEIADAYHISNNHVAKVAQTLVQLGYVQSLRGRSGGLVMAKPANEINVGELI
RQTENLKLLDCFGTESSCPIDPACKLKNALGKAQAAFLQTLDQYNLADFTDNSDELRILLKQV

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=140, Percent_Identity=43.5714285714286, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15885; Mature: 15885

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTTHTDYALRTLIYLSLRHDKLPTTIQEIADAYHISNNHVAKVAQTLVQLGYVQSLRG
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RSGGLVMAKPANEINVGELIRQTENLKLLDCFGTESSCPIDPACKLKNALGKAQAAFLQT
CCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LDQYNLADFTDNSDELRILLKQV
HHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MQLTTHTDYALRTLIYLSLRHDKLPTTIQEIADAYHISNNHVAKVAQTLVQLGYVQSLRG
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RSGGLVMAKPANEINVGELIRQTENLKLLDCFGTESSCPIDPACKLKNALGKAQAAFLQT
CCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LDQYNLADFTDNSDELRILLKQV
HHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA