| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110834968
Identifier: 110834968
GI number: 110834968
Start: 2413198
End: 2414688
Strand: Direct
Name: 110834968
Synonym: ABO_2107
Alternate gene names: NA
Gene position: 2413198-2414688 (Clockwise)
Preceding gene: 110834966
Following gene: 110834969
Centisome position: 77.34
GC content: 52.72
Gene sequence:
>1491_bases ATGGCAACGTTATTAACCGGATTGTTTCCCATGCAAGTAACGCACAACGTGGTCATTATTGGTGCCGGCTTCGGCGGGCT GGGCATGGCTATTCGCCTAAAAGCTCAAGGCCAAGATAATCTGCTGCTTATTGAGAAGGGCCACGACGTGGGGGGCTGCT GGCGCGATAACACCTACCCCGGTGCCGCCTGTGATGTGCCTTCCCATCTGTACTCCTTCTCTTTTGAGCGCCACTACCCT TGGAGCCGTCGCTTCGCCCAGCAAAAAGAGATTTTTGCCTACCAGCAATACTGCGCTCGCAAATACGATCTATACCGCCA TATACGCTTCAACACAGAAGTGGCAGAGGCGCGTTTTCTGGATGAACCCGGCTTATGGGAAATCACCATGACCAACGGCG AGGTCATCACCTGCCGAGCGTTGATCACTGCCACCGGTCAGCTCAACCAACCCGCCTACCCACCACTTTCAGGAATTGAA GACTTTCAGGGCCCGCACTTTCACAGTGCTCGCTGGAACCACGATGAGGACCTCACCGGTAAAACCGTAGCCGTGGTCGG CACCGGCGCCAGCGCCATTCAGTTTGTTCCCGAAATTGCCAAGGTGGCCGGCAAGGTCAAACTGTTCCAGCGCTCTGCAG CACATGTGATTCCCAAACCGGATCGCGCCTACCGCAAGGCCGAACACTGGATGCTGAAAAAGTTGCCCGTGACACAAACC CTGGATCGCATGCGTATCTATGCCGCCAATGAAGCACGGGTGCTGGGGTTTACCTCCTTCCAAAAAGCCATGCTCGTCTA CGAATGGCTCTTTGCCCGACAACTGAAAAAACAGATTAAAGACCCAGTACTGCGCGAAAAACTAACCCCAGATTACCCCA TGGGCTGTAAGCGCATCCTGATGTCCAACGATTATTACCCTGCGCTAGCCCAAGCGAATACGGAAGTGATCAACTACGGT ATTGATGCGGTAGATAAGAAAGGCCTCACCGATAGTAGCGGCACCCACCACAAAGTGGATGTAATCATTTACGGTACCGG CTTCAAGGCCACCGAATTTCTTACTCCAATGACCATTACTGGCCGCAACGGAAAAGACCTGAATAGCACCTGGCGGGACG GTGCAGAAGCGTACCTCGGCATTACTGTACGAGGCTTTCCAAACCTGTTCATGCTCTATGGCCCCAACACCAACCTGGGC CATAACTCGATTATTTACATGCTGGAAAGCCAAATCCATTACGTTCAACAATGCTTGGCAGAAATGGACGACCAACAGCT TCATTCCATGGAAGTACGCGAGAGCGTACAAGCGCGTTTCAACGATAACGTGCAGCGCAAAATCAGCGACACCGTTTGGG ACAAGGGCTGCCACAGCTGGTACAAAACCGATAGTGGTAAGAACACCAACAACTGGCCCGGTTTCACTTTTGACTACCGC CGCCAAACCCAACACTTGCAACTCAACGACTACGAGTACAAATCCCTATGA
Upstream 100 bases:
>100_bases GCACGCTGGTTATCGCTCTCTGTACCGCCATAATGTCCGTATTTCACAAATTTATGTCCCAGAATGCCATAAACAAAGCG TTTATGTATCGCTAGAGTGG
Downstream 100 bases:
>100_bases GCCTGTTTGTTGATCGCATCAGCCGTAGCCAGTCGACACTGCAACAAGTACTGGCAGGCACGCTACGCCAATCCCTGGCA CTACTATTCAAACCCGTTGC
Product: monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MATLLTGLFPMQVTHNVVIIGAGFGGLGMAIRLKAQGQDNLLLIEKGHDVGGCWRDNTYPGAACDVPSHLYSFSFERHYP WSRRFAQQKEIFAYQQYCARKYDLYRHIRFNTEVAEARFLDEPGLWEITMTNGEVITCRALITATGQLNQPAYPPLSGIE DFQGPHFHSARWNHDEDLTGKTVAVVGTGASAIQFVPEIAKVAGKVKLFQRSAAHVIPKPDRAYRKAEHWMLKKLPVTQT LDRMRIYAANEARVLGFTSFQKAMLVYEWLFARQLKKQIKDPVLREKLTPDYPMGCKRILMSNDYYPALAQANTEVINYG IDAVDKKGLTDSSGTHHKVDVIIYGTGFKATEFLTPMTITGRNGKDLNSTWRDGAEAYLGITVRGFPNLFMLYGPNTNLG HNSIIYMLESQIHYVQQCLAEMDDQQLHSMEVRESVQARFNDNVQRKISDTVWDKGCHSWYKTDSGKNTNNWPGFTFDYR RQTQHLQLNDYEYKSL
Sequences:
>Translated_496_residues MATLLTGLFPMQVTHNVVIIGAGFGGLGMAIRLKAQGQDNLLLIEKGHDVGGCWRDNTYPGAACDVPSHLYSFSFERHYP WSRRFAQQKEIFAYQQYCARKYDLYRHIRFNTEVAEARFLDEPGLWEITMTNGEVITCRALITATGQLNQPAYPPLSGIE DFQGPHFHSARWNHDEDLTGKTVAVVGTGASAIQFVPEIAKVAGKVKLFQRSAAHVIPKPDRAYRKAEHWMLKKLPVTQT LDRMRIYAANEARVLGFTSFQKAMLVYEWLFARQLKKQIKDPVLREKLTPDYPMGCKRILMSNDYYPALAQANTEVINYG IDAVDKKGLTDSSGTHHKVDVIIYGTGFKATEFLTPMTITGRNGKDLNSTWRDGAEAYLGITVRGFPNLFMLYGPNTNLG HNSIIYMLESQIHYVQQCLAEMDDQQLHSMEVRESVQARFNDNVQRKISDTVWDKGCHSWYKTDSGKNTNNWPGFTFDYR RQTQHLQLNDYEYKSL >Mature_495_residues ATLLTGLFPMQVTHNVVIIGAGFGGLGMAIRLKAQGQDNLLLIEKGHDVGGCWRDNTYPGAACDVPSHLYSFSFERHYPW SRRFAQQKEIFAYQQYCARKYDLYRHIRFNTEVAEARFLDEPGLWEITMTNGEVITCRALITATGQLNQPAYPPLSGIED FQGPHFHSARWNHDEDLTGKTVAVVGTGASAIQFVPEIAKVAGKVKLFQRSAAHVIPKPDRAYRKAEHWMLKKLPVTQTL DRMRIYAANEARVLGFTSFQKAMLVYEWLFARQLKKQIKDPVLREKLTPDYPMGCKRILMSNDYYPALAQANTEVINYGI DAVDKKGLTDSSGTHHKVDVIIYGTGFKATEFLTPMTITGRNGKDLNSTWRDGAEAYLGITVRGFPNLFMLYGPNTNLGH NSIIYMLESQIHYVQQCLAEMDDQQLHSMEVRESVQARFNDNVQRKISDTVWDKGCHSWYKTDSGKNTNNWPGFTFDYRR QTQHLQLNDYEYKSL
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503755, Length=371, Percent_Identity=23.1805929919137, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI4503757, Length=226, Percent_Identity=28.3185840707965, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4503759, Length=357, Percent_Identity=22.6890756302521, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI221316674, Length=223, Percent_Identity=27.3542600896861, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI221316672, Length=223, Percent_Identity=27.3542600896861, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI221316678, Length=221, Percent_Identity=27.1493212669683, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI50541965, Length=380, Percent_Identity=23.6842105263158, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI50541961, Length=380, Percent_Identity=23.6842105263158, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25145785, Length=242, Percent_Identity=26.0330578512397, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 56537; Mature: 56406
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLLTGLFPMQVTHNVVIIGAGFGGLGMAIRLKAQGQDNLLLIEKGHDVGGCWRDNTYP CCCHHHHCCHHEEECCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCEECCCCCC GAACDVPSHLYSFSFERHYPWSRRFAQQKEIFAYQQYCARKYDLYRHIRFNTEVAEARFL CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCC DEPGLWEITMTNGEVITCRALITATGQLNQPAYPPLSGIEDFQGPHFHSARWNHDEDLTG CCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC KTVAVVGTGASAIQFVPEIAKVAGKVKLFQRSAAHVIPKPDRAYRKAEHWMLKKLPVTQT CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHH LDRMRIYAANEARVLGFTSFQKAMLVYEWLFARQLKKQIKDPVLREKLTPDYPMGCKRIL HHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHH MSNDYYPALAQANTEVINYGIDAVDKKGLTDSSGTHHKVDVIIYGTGFKATEFLTPMTIT HCCCCCCHHHHCCCEEEECCCCHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCEEEE GRNGKDLNSTWRDGAEAYLGITVRGFPNLFMLYGPNTNLGHNSIIYMLESQIHYVQQCLA CCCCCCCCHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHH EMDDQQLHSMEVRESVQARFNDNVQRKISDTVWDKGCHSWYKTDSGKNTNNWPGFTFDYR HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHC RQTQHLQLNDYEYKSL CCCCEEEECCCCCCCC >Mature Secondary Structure ATLLTGLFPMQVTHNVVIIGAGFGGLGMAIRLKAQGQDNLLLIEKGHDVGGCWRDNTYP CCHHHHCCHHEEECCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCEECCCCCC GAACDVPSHLYSFSFERHYPWSRRFAQQKEIFAYQQYCARKYDLYRHIRFNTEVAEARFL CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCC DEPGLWEITMTNGEVITCRALITATGQLNQPAYPPLSGIEDFQGPHFHSARWNHDEDLTG CCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC KTVAVVGTGASAIQFVPEIAKVAGKVKLFQRSAAHVIPKPDRAYRKAEHWMLKKLPVTQT CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHH LDRMRIYAANEARVLGFTSFQKAMLVYEWLFARQLKKQIKDPVLREKLTPDYPMGCKRIL HHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHH MSNDYYPALAQANTEVINYGIDAVDKKGLTDSSGTHHKVDVIIYGTGFKATEFLTPMTIT HCCCCCCHHHHCCCEEEECCCCHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCEEEE GRNGKDLNSTWRDGAEAYLGITVRGFPNLFMLYGPNTNLGHNSIIYMLESQIHYVQQCLA CCCCCCCCHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHH EMDDQQLHSMEVRESVQARFNDNVQRKISDTVWDKGCHSWYKTDSGKNTNNWPGFTFDYR HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHC RQTQHLQLNDYEYKSL CCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]