| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pldA [H]
Identifier: 110834965
GI number: 110834965
Start: 2409879
End: 2410916
Strand: Direct
Name: pldA [H]
Synonym: ABO_2104
Alternate gene names: 110834965
Gene position: 2409879-2410916 (Clockwise)
Preceding gene: 110834964
Following gene: 110834966
Centisome position: 77.24
GC content: 50.87
Gene sequence:
>1038_bases ATGCATATCCGCCTTATGTTCGCCCTAGCGCTGGCCAGCTCCCTTCTTTGCGCCGAGGAGCCGGCCAATAACGATCCTCC TGTACCCGACAGCCCAGCCATCAACATGACAGAAGAGCAAAAGCTCAATAACTGTCTGTTACGCAGTGCCCAGACCGCTA ATGGCAATGTAACACTGCACGAAATGCGCGGTTGGTGTACGAACGGCGAAGAACAAGAGAGAATCAGTAGCCATGAGAAC GCCCTGCGAGCCAGGCTGGCACTGGAAAATACCACCCGCGGCAATCCCTTTGTCATCACCCCTCATCGCCGAAACTACCT GATGCCGTATAGTTACTGGTCCAATCGGCAGTGGAACGACCCCACCAAGAAGGACAGTGATCTACAACCCTCTGAGGTCA AATTTCAGTTATCGCTGAAAGCCCCTATCAAAGAAAAGATTTTCGATGACATTACCCTTTGGATGGCCTTTACCGGCACG TTCTATTGGCAGGCTTACAACAGTGACCTCTCGGCCCCATTCCGTGAAGCCAATTACGAGCCGGAATTATTCATTACCAA ACCGATTGATTGGCAAATCGGACCTCTAGATTCGGAGCTATTGGCGCTAGGGTTCAACCATCAGTCCAACGGCCAGGATG TGCCCGTTTCACGTAGCTGGAACCGTATCTTCATGAACTATGTGTTCAAGACAGGGGATTACTACTGGTCCTTCAAACCT TGGTATCGCATTCCTGAAGATAAAAAAGACTCCCCCACAGATGCCGGCGGTGACGACAACCCGGATATCGAAAAGTACAT GGGCAATTTCGAACTGGAAGTCGCACACCCATTCGGCAACCACGTGGTCGAACTGATGCTACGCAACAATCTACGTTCGG AGAATAAGGGCGCAGGCCGCCTCAATTACTCATTCCCGCTAAGCAAACGCTTCAAAGGCTTGGTGCAGGTTTTCTCCGGG TACGGGGATTCACTGATTAATTACGACAATTATGAGAACCGCTACAGCTTCGGGATCCTGTTGACGGATTCTCTATAG
Upstream 100 bases:
>100_bases TACCGGTCATGCTGGAAGAGCAGGCACGCGCCATGAGTGATGAAGAAGCCCTGTCACTATAACATTTAGCTCCACTACTC CTCGCCACAGGAAGGCCCTC
Downstream 100 bases:
>100_bases AGGCAGCCGCGAGCCACACGTTTTAAATAAGACACCAAAGGCTCTCTTGAAAGTGCACACAGATTGCAGCGCAGCCAAGA GAGCGTTTCGGAGTCAACGG
Product: outer membrane phospholipase A
Products: NA
Alternate protein names: Detergent-resistant phospholipase A; DR-phospholipase A; Outer membrane phospholipase A; OM PLA; Phosphatidylcholine 1-acylhydrolase [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MHIRLMFALALASSLLCAEEPANNDPPVPDSPAINMTEEQKLNNCLLRSAQTANGNVTLHEMRGWCTNGEEQERISSHEN ALRARLALENTTRGNPFVITPHRRNYLMPYSYWSNRQWNDPTKKDSDLQPSEVKFQLSLKAPIKEKIFDDITLWMAFTGT FYWQAYNSDLSAPFREANYEPELFITKPIDWQIGPLDSELLALGFNHQSNGQDVPVSRSWNRIFMNYVFKTGDYYWSFKP WYRIPEDKKDSPTDAGGDDNPDIEKYMGNFELEVAHPFGNHVVELMLRNNLRSENKGAGRLNYSFPLSKRFKGLVQVFSG YGDSLINYDNYENRYSFGILLTDSL
Sequences:
>Translated_345_residues MHIRLMFALALASSLLCAEEPANNDPPVPDSPAINMTEEQKLNNCLLRSAQTANGNVTLHEMRGWCTNGEEQERISSHEN ALRARLALENTTRGNPFVITPHRRNYLMPYSYWSNRQWNDPTKKDSDLQPSEVKFQLSLKAPIKEKIFDDITLWMAFTGT FYWQAYNSDLSAPFREANYEPELFITKPIDWQIGPLDSELLALGFNHQSNGQDVPVSRSWNRIFMNYVFKTGDYYWSFKP WYRIPEDKKDSPTDAGGDDNPDIEKYMGNFELEVAHPFGNHVVELMLRNNLRSENKGAGRLNYSFPLSKRFKGLVQVFSG YGDSLINYDNYENRYSFGILLTDSL >Mature_345_residues MHIRLMFALALASSLLCAEEPANNDPPVPDSPAINMTEEQKLNNCLLRSAQTANGNVTLHEMRGWCTNGEEQERISSHEN ALRARLALENTTRGNPFVITPHRRNYLMPYSYWSNRQWNDPTKKDSDLQPSEVKFQLSLKAPIKEKIFDDITLWMAFTGT FYWQAYNSDLSAPFREANYEPELFITKPIDWQIGPLDSELLALGFNHQSNGQDVPVSRSWNRIFMNYVFKTGDYYWSFKP WYRIPEDKKDSPTDAGGDDNPDIEKYMGNFELEVAHPFGNHVVELMLRNNLRSENKGAGRLNYSFPLSKRFKGLVQVFSG YGDSLINYDNYENRYSFGILLTDSL
Specific function: Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities [H]
COG id: COG2829
COG function: function code M; Outer membrane phospholipase A
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Note=One of the very few enzymes located there (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phospholipase A1 family [H]
Homologues:
Organism=Escherichia coli, GI2367300, Length=258, Percent_Identity=35.6589147286822, Blast_Score=154, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003187 [H]
Pfam domain/function: PF02253 PLA1 [H]
EC number: =3.1.1.32; =3.1.1.4 [H]
Molecular weight: Translated: 39799; Mature: 39799
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIRLMFALALASSLLCAEEPANNDPPVPDSPAINMTEEQKLNNCLLRSAQTANGNVTLH CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE EMRGWCTNGEEQERISSHENALRARLALENTTRGNPFVITPHRRNYLMPYSYWSNRQWND ECCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCEEECCCCCCCCCCCC PTKKDSDLQPSEVKFQLSLKAPIKEKIFDDITLWMAFTGTFYWQAYNSDLSAPFREANYE CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHEEEHHHCEEEEEEECCCCCCCHHHCCCC PELFITKPIDWQIGPLDSELLALGFNHQSNGQDVPVSRSWNRIFMNYVFKTGDYYWSFKP CCEEEECCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHEEEHEEECCCEEEECCC WYRIPEDKKDSPTDAGGDDNPDIEKYMGNFELEVAHPFGNHVVELMLRNNLRSENKGAGR CEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCE LNYSFPLSKRFKGLVQVFSGYGDSLINYDNYENRYSFGILLTDSL EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MHIRLMFALALASSLLCAEEPANNDPPVPDSPAINMTEEQKLNNCLLRSAQTANGNVTLH CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE EMRGWCTNGEEQERISSHENALRARLALENTTRGNPFVITPHRRNYLMPYSYWSNRQWND ECCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCEEECCCCCCCCCCCC PTKKDSDLQPSEVKFQLSLKAPIKEKIFDDITLWMAFTGTFYWQAYNSDLSAPFREANYE CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHEEEHHHCEEEEEEECCCCCCCHHHCCCC PELFITKPIDWQIGPLDSELLALGFNHQSNGQDVPVSRSWNRIFMNYVFKTGDYYWSFKP CCEEEECCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHEEEHEEECCCEEEECCC WYRIPEDKKDSPTDAGGDDNPDIEKYMGNFELEVAHPFGNHVVELMLRNNLRSENKGAGR CEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCE LNYSFPLSKRFKGLVQVFSGYGDSLINYDNYENRYSFGILLTDSL EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8300539 [H]