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The map label for this gene is yejA [C]

Identifier: 110636408

GI number: 110636408

Start: 4394796

End: 4396664

Strand: Reverse

Name: yejA [C]

Synonym: Meso_4084

Alternate gene names: 110636408

Gene position: 4396664-4394796 (Counterclockwise)

Preceding gene: 110636409

Following gene: 110636407

Centisome position: 99.64

GC content: 58.8

Gene sequence:

>1869_bases
ATGCTGGCTAAGGTCATCGAACAGGGGAAAAAGCTAACCCTTGTCGGTCTTGGGATGTTCTTACTGGTCGCGAACGCAAG
CGCGCAGGAGTGGCGCACCACAAGTTCGCTGGTCAATCCTGAGGCGGAGACCAAGCCCTTTGAACGCTACAGCTATGTAA
ATCCAGAAGCACCGAAGGGCGGCACTCTGAACTCCGCCGTCTTCGGCACATTCGACAGCTTCAATCCCTTCATTGTGCGC
GGCACGCCGGCGGCGGGCCTCACCTATTTCGGCGGCATGTTGTGGGAAACGCTCATGCAACAGTCGCCCGAAGATCCGGG
CACCAGCCATCCGTTGATCGCCGAGGCGTTCAAATACCCGGAGGATTATTCCTCGGCCACCTACCGTCTCAATCCGAACG
CCCGCTGGCATGACGGCAAACCTGTCACCGTGGAGGACGTGATCTGGTCGTTCAACATGCTCAAGGAGATCAGTCCGCAG
CACAACCGCTATTTCGCGAATGTCGAGGAGGCCGTCGCGCTCTCCGACACAGAGGTCGAATTCCGCTTCGACCAGGGCGG
AAACCGCGAGCTGCCGCATATCATGGGCGACCTTCCGGTCCTTCCCAAGCACTGGTGGGAGGGGACGGATTCCCAAGGCA
GGCAGCGTAATCTCAGAAATCCCACCCTGGAGCCGCCGCTCGGCAGCGGACCCTACAAAATCGCGAGCTTCCGCCCCGGC
TCGGAAATCATATGGGAGCGCGCCGAAGATTATTGGGCTGCGAATCTGCCGGTCAATATCGGCCGGTACAATTTCGATCG
CATCCGATACACGTATTTCCAGGACGACAATGCCGAGTTCCTGGCGTTCCAGAAAGGCGGCATCGAGGATGTACGGCGCG
AGCTGAGCACGCGGCGCTGGTCACAGGAATATGACTTTCCCGCGGTGCAGGATGGCGACGTCATCAAGCGTGAATTTACC
AGCACGGCCATCGAGGGGATGCAGGCCTTCGTCTTCAATATGCGGAGACCTCGGTTCCAGGACAGCCGCGTGCGCGAGGC
TCTTACGCTGGCATACAATTTCGAGGAACAGAACAGAACGCAGTTCTTCGGGCTCAACAAGCGCTTCAGCAGCTATTTCG
AGCGCTCGGAGCTGGCATCGAGCGGTCTGCCCCAAGGGCAGGAGCTGGAAATCCTGGAGGAATTCCGCGATCAACTTCCG
CCGGAAGTTTTTACCGAAGAGTTCAAGCTGCCCGTCTATGATTCGCCGCAGTCCGAACGGCAATATCTGCGCGAGGCGGT
TCGCCTCTTCAACGAGGCCGGGTGGGAAATCCAAAGCGGCCGGATGATCAGCAAAGAGACAGGCGAGCAATTCCGCATCG
AGTTTCTTGGAGCATCGCCGACCGCCGAGGTCATCACCGGCGGCTTCATGGCCAATCTACGGAAGATCGGAATCAATGCG
ACGCTGCGCATCGTCGACACGTCGCAATATATACAGCGTGTTCAGAACTTCGAATTCGATGCCATCACAGCCCGCTTCCC
CCAGTCCAACTCTCCGGGCAACGAGCAGCGGGATTACTGGAGTTCGGAGGCCGCCGACATCCCGGGTTCGCAAAACGTGA
TCGGCATCAAGGATCCGGTGGTGGACGCCTTGGTGAACAAGATCATCTACGCCAAGAACCGCGAGGAACTCGTCGCGACG
GTTAGGGCGCTCGATCGCGTGCTCCTCTGGAAGTACTACGCGATCCCGCAATACTACCAGCCCACCCTTCGCTATGCCTA
CTGGAACAAATTCGGCATACCGGAAAAGCAGCCGGGCTATGCGGGCGTGGATGTCGATTCCTGGTGGGTCGATCCCGAGC
TCGAGGCGGCGCTCGAGGCGAAGTACTAG

Upstream 100 bases:

>100_bases
AGCCGGCTTATGCCGGCTTTTTTATTTTTGCCGCGCCCCACCGATTGCCATCAGCCGCAGATGAACTACCTTCGGCAAAA
CGGAACGGGAGATGTGCCGC

Downstream 100 bases:

>100_bases
CCGGAATGACCATGGATTTCTTCGCGCTCACCCGACGCCGGTTCCTGGAGCTCTCTGGAGCGGCAATAGCCGCTCCGGTT
GCCGGACGCGTCGCCTTTGC

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MLAKVIEQGKKLTLVGLGMFLLVANASAQEWRTTSSLVNPEAETKPFERYSYVNPEAPKGGTLNSAVFGTFDSFNPFIVR
GTPAAGLTYFGGMLWETLMQQSPEDPGTSHPLIAEAFKYPEDYSSATYRLNPNARWHDGKPVTVEDVIWSFNMLKEISPQ
HNRYFANVEEAVALSDTEVEFRFDQGGNRELPHIMGDLPVLPKHWWEGTDSQGRQRNLRNPTLEPPLGSGPYKIASFRPG
SEIIWERAEDYWAANLPVNIGRYNFDRIRYTYFQDDNAEFLAFQKGGIEDVRRELSTRRWSQEYDFPAVQDGDVIKREFT
STAIEGMQAFVFNMRRPRFQDSRVREALTLAYNFEEQNRTQFFGLNKRFSSYFERSELASSGLPQGQELEILEEFRDQLP
PEVFTEEFKLPVYDSPQSERQYLREAVRLFNEAGWEIQSGRMISKETGEQFRIEFLGASPTAEVITGGFMANLRKIGINA
TLRIVDTSQYIQRVQNFEFDAITARFPQSNSPGNEQRDYWSSEAADIPGSQNVIGIKDPVVDALVNKIIYAKNREELVAT
VRALDRVLLWKYYAIPQYYQPTLRYAYWNKFGIPEKQPGYAGVDVDSWWVDPELEAALEAKY

Sequences:

>Translated_622_residues
MLAKVIEQGKKLTLVGLGMFLLVANASAQEWRTTSSLVNPEAETKPFERYSYVNPEAPKGGTLNSAVFGTFDSFNPFIVR
GTPAAGLTYFGGMLWETLMQQSPEDPGTSHPLIAEAFKYPEDYSSATYRLNPNARWHDGKPVTVEDVIWSFNMLKEISPQ
HNRYFANVEEAVALSDTEVEFRFDQGGNRELPHIMGDLPVLPKHWWEGTDSQGRQRNLRNPTLEPPLGSGPYKIASFRPG
SEIIWERAEDYWAANLPVNIGRYNFDRIRYTYFQDDNAEFLAFQKGGIEDVRRELSTRRWSQEYDFPAVQDGDVIKREFT
STAIEGMQAFVFNMRRPRFQDSRVREALTLAYNFEEQNRTQFFGLNKRFSSYFERSELASSGLPQGQELEILEEFRDQLP
PEVFTEEFKLPVYDSPQSERQYLREAVRLFNEAGWEIQSGRMISKETGEQFRIEFLGASPTAEVITGGFMANLRKIGINA
TLRIVDTSQYIQRVQNFEFDAITARFPQSNSPGNEQRDYWSSEAADIPGSQNVIGIKDPVVDALVNKIIYAKNREELVAT
VRALDRVLLWKYYAIPQYYQPTLRYAYWNKFGIPEKQPGYAGVDVDSWWVDPELEAALEAKY
>Mature_622_residues
MLAKVIEQGKKLTLVGLGMFLLVANASAQEWRTTSSLVNPEAETKPFERYSYVNPEAPKGGTLNSAVFGTFDSFNPFIVR
GTPAAGLTYFGGMLWETLMQQSPEDPGTSHPLIAEAFKYPEDYSSATYRLNPNARWHDGKPVTVEDVIWSFNMLKEISPQ
HNRYFANVEEAVALSDTEVEFRFDQGGNRELPHIMGDLPVLPKHWWEGTDSQGRQRNLRNPTLEPPLGSGPYKIASFRPG
SEIIWERAEDYWAANLPVNIGRYNFDRIRYTYFQDDNAEFLAFQKGGIEDVRRELSTRRWSQEYDFPAVQDGDVIKREFT
STAIEGMQAFVFNMRRPRFQDSRVREALTLAYNFEEQNRTQFFGLNKRFSSYFERSELASSGLPQGQELEILEEFRDQLP
PEVFTEEFKLPVYDSPQSERQYLREAVRLFNEAGWEIQSGRMISKETGEQFRIEFLGASPTAEVITGGFMANLRKIGINA
TLRIVDTSQYIQRVQNFEFDAITARFPQSNSPGNEQRDYWSSEAADIPGSQNVIGIKDPVVDALVNKIIYAKNREELVAT
VRALDRVLLWKYYAIPQYYQPTLRYAYWNKFGIPEKQPGYAGVDVDSWWVDPELEAALEAKY

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=610, Percent_Identity=35.4098360655738, Blast_Score=383, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 71404; Mature: 71404

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKVIEQGKKLTLVGLGMFLLVANASAQEWRTTSSLVNPEAETKPFERYSYVNPEAPKG
CCHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCC
GTLNSAVFGTFDSFNPFIVRGTPAAGLTYFGGMLWETLMQQSPEDPGTSHPLIAEAFKYP
CCCCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
EDYSSATYRLNPNARWHDGKPVTVEDVIWSFNMLKEISPQHNRYFANVEEAVALSDTEVE
CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHEECCCEEE
FRFDQGGNRELPHIMGDLPVLPKHWWEGTDSQGRQRNLRNPTLEPPLGSGPYKIASFRPG
EEECCCCCCCCCHHHCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCC
SEIIWERAEDYWAANLPVNIGRYNFDRIRYTYFQDDNAEFLAFQKGGIEDVRRELSTRRW
HHHHHHHHHCCEEECCCEECCCEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHC
SQEYDFPAVQDGDVIKREFTSTAIEGMQAFVFNMRRPRFQDSRVREALTLAYNFEEQNRT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCC
QFFGLNKRFSSYFERSELASSGLPQGQELEILEEFRDQLPPEVFTEEFKLPVYDSPQSER
EEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHH
QYLREAVRLFNEAGWEIQSGRMISKETGEQFRIEFLGASPTAEVITGGFMANLRKIGINA
HHHHHHHHHHHHCCCEECCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCE
TLRIVDTSQYIQRVQNFEFDAITARFPQSNSPGNEQRDYWSSEAADIPGSQNVIGIKDPV
EEEEEECHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCHHH
VDALVNKIIYAKNREELVATVRALDRVLLWKYYAIPQYYQPTLRYAYWNKFGIPEKQPGY
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCCCCCCC
AGVDVDSWWVDPELEAALEAKY
CCCCCCCEECCCCHHHHHCCCC
>Mature Secondary Structure
MLAKVIEQGKKLTLVGLGMFLLVANASAQEWRTTSSLVNPEAETKPFERYSYVNPEAPKG
CCHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCC
GTLNSAVFGTFDSFNPFIVRGTPAAGLTYFGGMLWETLMQQSPEDPGTSHPLIAEAFKYP
CCCCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
EDYSSATYRLNPNARWHDGKPVTVEDVIWSFNMLKEISPQHNRYFANVEEAVALSDTEVE
CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHEECCCEEE
FRFDQGGNRELPHIMGDLPVLPKHWWEGTDSQGRQRNLRNPTLEPPLGSGPYKIASFRPG
EEECCCCCCCCCHHHCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCC
SEIIWERAEDYWAANLPVNIGRYNFDRIRYTYFQDDNAEFLAFQKGGIEDVRRELSTRRW
HHHHHHHHHCCEEECCCEECCCEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHC
SQEYDFPAVQDGDVIKREFTSTAIEGMQAFVFNMRRPRFQDSRVREALTLAYNFEEQNRT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCC
QFFGLNKRFSSYFERSELASSGLPQGQELEILEEFRDQLPPEVFTEEFKLPVYDSPQSER
EEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHH
QYLREAVRLFNEAGWEIQSGRMISKETGEQFRIEFLGASPTAEVITGGFMANLRKIGINA
HHHHHHHHHHHHCCCEECCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCE
TLRIVDTSQYIQRVQNFEFDAITARFPQSNSPGNEQRDYWSSEAADIPGSQNVIGIKDPV
EEEEEECHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCHHH
VDALVNKIIYAKNREELVATVRALDRVLLWKYYAIPQYYQPTLRYAYWNKFGIPEKQPGY
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCCCCCCC
AGVDVDSWWVDPELEAALEAKY
CCCCCCCEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]