Click here to switch to the map view.

The map label for this gene is 110636293

Identifier: 110636293

GI number: 110636293

Start: 4273114

End: 4274085

Strand: Reverse

Name: 110636293

Synonym: Meso_3969

Alternate gene names: NA

Gene position: 4274085-4273114 (Counterclockwise)

Preceding gene: 110636294

Following gene: 110636292

Centisome position: 96.86

GC content: 55.35

Gene sequence:

>972_bases
ATGTCGCATCGAACGCTAGCCAAAGAGGCAATAGCGGAGACTTTGAGAACTGCCCTCATCGAGAAGACGCTTCCTGAAGG
CGCTGTCCTTCTGGAGGGTCCAATCGCGACGCTCTTCAATGCAAGCCGAACGCCCGTCAAACAAGCGCTCGCTACCCTGG
AATCCGAAGGGCTGGTCCGGCGGTTCAAGGGGCGGGGATTGCTTGCGGGAAAAGAAGGAGAACCACTCCGAATTAAAGTG
ACCCCAGAGATGCTGAAGCTCAACCCGGAAGGTCATGAGTACCCTAAGACATTCGCGTGGGAGAGTTTTTATTACGACTT
CGAGAAAACGGTCATTCTGCGCGCCGTGTACGGGACAGCCCGTGTGAATGAGTTGGCATTGTCGCGTCACTACGGCGTTA
GCCGGACCGTCGCCGGTGACATCCTGAATAGAGGCGCGGAAAAGGGGATCGTTAGCAGAGACGAGAAATCGAGATGGTTC
GTGAACCCGCTCGACGAAAGGCGCTTTCGTGATCTCTATGAGGTGCGGGCACTTCTGGAGCCGGCAGCTCTGCAAACCGC
GATCGACCACGCTCCAGTCGAGTTCGTCCAAGGCCTCAGGTCGCGGCTTCTAAGAACGAGCGAACATTTCCCTGATGTCC
AAGGCGCCGAGTTGGATGAGTTGGAGAAGGACCTCCATATCGATCTGCTTCAGTGGACCGGAAATATCGAGATCATCGAA
GGACTCCGGCGTACGCATTGTGTGCTGGTTGCCGGAAAGCATATTCAGCGGGCAATCCGAGGAATGACGGGAATCGATGC
ATTCATGGGCGAGCATCTTGAGATCGTGGACGCTGTCCTGGAGAAGGACCATCAGTTAGCAAAAGCTCGTCTCTCCGCGC
ACCTACTGGCATCCAGTCGAAAGGCGGCCGAACGGATTCACGCATTTCGATCGGTAAACCAGATGGAATCTGTGAGCTAT
TTGGTAAGCTAG

Upstream 100 bases:

>100_bases
AGCATCCGGCGAGAAAAGCTTGAGCGAAACATTCGGCTATGGTGATAACGAGTTCGTTCCCTGGCAAATCGGGGCTGTCA
CTTAGAATGAGTAGGGGGCT

Downstream 100 bases:

>100_bases
CCGCGGCGCTTTCGAAGCGGAACCGGAGCATTCCCCTGCCCCGGCCATGACTCCCCTGCACCTTTAGCCGGACAATAAGT
TGCTGCGGAATGTGGCAGGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Regulatory Protein GntR; GntR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator Protein

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSHRTLAKEAIAETLRTALIEKTLPEGAVLLEGPIATLFNASRTPVKQALATLESEGLVRRFKGRGLLAGKEGEPLRIKV
TPEMLKLNPEGHEYPKTFAWESFYYDFEKTVILRAVYGTARVNELALSRHYGVSRTVAGDILNRGAEKGIVSRDEKSRWF
VNPLDERRFRDLYEVRALLEPAALQTAIDHAPVEFVQGLRSRLLRTSEHFPDVQGAELDELEKDLHIDLLQWTGNIEIIE
GLRRTHCVLVAGKHIQRAIRGMTGIDAFMGEHLEIVDAVLEKDHQLAKARLSAHLLASSRKAAERIHAFRSVNQMESVSY
LVS

Sequences:

>Translated_323_residues
MSHRTLAKEAIAETLRTALIEKTLPEGAVLLEGPIATLFNASRTPVKQALATLESEGLVRRFKGRGLLAGKEGEPLRIKV
TPEMLKLNPEGHEYPKTFAWESFYYDFEKTVILRAVYGTARVNELALSRHYGVSRTVAGDILNRGAEKGIVSRDEKSRWF
VNPLDERRFRDLYEVRALLEPAALQTAIDHAPVEFVQGLRSRLLRTSEHFPDVQGAELDELEKDLHIDLLQWTGNIEIIE
GLRRTHCVLVAGKHIQRAIRGMTGIDAFMGEHLEIVDAVLEKDHQLAKARLSAHLLASSRKAAERIHAFRSVNQMESVSY
LVS
>Mature_322_residues
SHRTLAKEAIAETLRTALIEKTLPEGAVLLEGPIATLFNASRTPVKQALATLESEGLVRRFKGRGLLAGKEGEPLRIKVT
PEMLKLNPEGHEYPKTFAWESFYYDFEKTVILRAVYGTARVNELALSRHYGVSRTVAGDILNRGAEKGIVSRDEKSRWFV
NPLDERRFRDLYEVRALLEPAALQTAIDHAPVEFVQGLRSRLLRTSEHFPDVQGAELDELEKDLHIDLLQWTGNIEIIEG
LRRTHCVLVAGKHIQRAIRGMTGIDAFMGEHLEIVDAVLEKDHQLAKARLSAHLLASSRKAAERIHAFRSVNQMESVSYL
VS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36330; Mature: 36199

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRTLAKEAIAETLRTALIEKTLPEGAVLLEGPIATLFNASRTPVKQALATLESEGLVR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHH
RFKGRGLLAGKEGEPLRIKVTPEMLKLNPEGHEYPKTFAWESFYYDFEKTVILRAVYGTA
HHCCCCEEECCCCCCEEEEECHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RVNELALSRHYGVSRTVAGDILNRGAEKGIVSRDEKSRWFVNPLDERRFRDLYEVRALLE
HHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
PAALQTAIDHAPVEFVQGLRSRLLRTSEHFPDVQGAELDELEKDLHIDLLQWTGNIEIIE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEHHHHCCCHHHHH
GLRRTHCVLVAGKHIQRAIRGMTGIDAFMGEHLEIVDAVLEKDHQLAKARLSAHLLASSR
HHHHHHEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAERIHAFRSVNQMESVSYLVS
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHRTLAKEAIAETLRTALIEKTLPEGAVLLEGPIATLFNASRTPVKQALATLESEGLVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHH
RFKGRGLLAGKEGEPLRIKVTPEMLKLNPEGHEYPKTFAWESFYYDFEKTVILRAVYGTA
HHCCCCEEECCCCCCEEEEECHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RVNELALSRHYGVSRTVAGDILNRGAEKGIVSRDEKSRWFVNPLDERRFRDLYEVRALLE
HHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
PAALQTAIDHAPVEFVQGLRSRLLRTSEHFPDVQGAELDELEKDLHIDLLQWTGNIEIIE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEHHHHCCCHHHHH
GLRRTHCVLVAGKHIQRAIRGMTGIDAFMGEHLEIVDAVLEKDHQLAKARLSAHLLASSR
HHHHHHEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAERIHAFRSVNQMESVSYLVS
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA