| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is fur [H]
Identifier: 110636271
GI number: 110636271
Start: 4253210
End: 4253638
Strand: Reverse
Name: fur [H]
Synonym: Meso_3947
Alternate gene names: 110636271
Gene position: 4253638-4253210 (Counterclockwise)
Preceding gene: 110636275
Following gene: 110636270
Centisome position: 96.4
GC content: 57.58
Gene sequence:
>429_bases ATGAGTGAAACGGTGCCGAACAGGGTGAAATACGAGGAAAAGCTCCGCCGCGCCGGGATCCGGATCACTCGCCCCCGGCA GGTGATCCTGAGCATTCTCGCGCAGACGGAAGACCACCCGGACGCGATGGAGATTTTCAGCCGCGCCTCAGAGATTGATC CCAGCATCTCACTTTCCACAGTCTATCGCACCATGAAACTGCTCGAGGAACTTGGTGCCATCCACCGCCACGCATTCGAG GGCGGGCGGGCCCGCTTCGAGCAGGCAAGCCAACATCATGACCATTTGATCGATATCGATACCGGTGATGTGATAGAGTT CCATTCAACAAAAATCGAGGCGCTGCAGGACGAGATCGCCCGTTCGCTGGGTTACGATATCGTTCATCATAGGCTGGAGC TTTACGGCAGGAAGCGGCGACGCCGCTAG
Upstream 100 bases:
>100_bases CTGTGCCGCTGCCTGTCAACAGGTTTGCGCTCGCGTGCGGCGGTGTTAAAGACCCGGCTGCGACTTTGCAACAAAGGCCG ATTTAGCGCATAGTCTTATA
Downstream 100 bases:
>100_bases GCTACCGAAAAGCATGGGTTACTCTGCACGCCAGCGCACACAAGATGGGTCTGTCTTCATATGGAAAAAGCTGACATCGG TCTTATCGGTCTTGGGACCA
Product: FUR family manganese uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSETVPNRVKYEEKLRRAGIRITRPRQVILSILAQTEDHPDAMEIFSRASEIDPSISLSTVYRTMKLLEELGAIHRHAFE GGRARFEQASQHHDHLIDIDTGDVIEFHSTKIEALQDEIARSLGYDIVHHRLELYGRKRRRR
Sequences:
>Translated_142_residues MSETVPNRVKYEEKLRRAGIRITRPRQVILSILAQTEDHPDAMEIFSRASEIDPSISLSTVYRTMKLLEELGAIHRHAFE GGRARFEQASQHHDHLIDIDTGDVIEFHSTKIEALQDEIARSLGYDIVHHRLELYGRKRRRR >Mature_141_residues SETVPNRVKYEEKLRRAGIRITRPRQVILSILAQTEDHPDAMEIFSRASEIDPSISLSTVYRTMKLLEELGAIHRHAFEG GRARFEQASQHHDHLIDIDTGDVIEFHSTKIEALQDEIARSLGYDIVHHRLELYGRKRRRR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=124, Percent_Identity=42.741935483871, Blast_Score=100, Evalue=3e-23,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16552; Mature: 16421
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETVPNRVKYEEKLRRAGIRITRPRQVILSILAQTEDHPDAMEIFSRASEIDPSISLST CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHH VYRTMKLLEELGAIHRHAFEGGRARFEQASQHHDHLIDIDTGDVIEFHSTKIEALQDEIA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHH RSLGYDIVHHRLELYGRKRRRR HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SETVPNRVKYEEKLRRAGIRITRPRQVILSILAQTEDHPDAMEIFSRASEIDPSISLST CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHH VYRTMKLLEELGAIHRHAFEGGRARFEQASQHHDHLIDIDTGDVIEFHSTKIEALQDEIA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHH RSLGYDIVHHRLELYGRKRRRR HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA