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The map label for this gene is ycjY [H]

Identifier: 110636235

GI number: 110636235

Start: 4211732

End: 4212835

Strand: Reverse

Name: ycjY [H]

Synonym: Meso_3911

Alternate gene names: 110636235

Gene position: 4212835-4211732 (Counterclockwise)

Preceding gene: 110636236

Following gene: 110636234

Centisome position: 95.48

GC content: 61.14

Gene sequence:

>1104_bases
ATGTCCGGCGAAACTATCGACAGGAAAAGAAGAGAATTTCTTGGGACCTCAGCTCTCGTGTTGTCCGCCGCAATGACAGG
AGTTCTAACAATGACCAGCGCCAATGCTGTCGCATCCGAAAATCCGTTCACGCTCGTTTATCGCGGCGCGATCACGGAAA
ACGTGCCGGGACAGTTCAATATCCACCCGGTCAACTACGACCTCAACGGCCTCGACATCGTCGCCAACGTCTACACCCCG
GCGGACTACGACCCCGACCAGCAATATCCCGCGATCGTGGTGGCGCACCCGAATGGCGGCGTCAAGGAACAGGTCGCGGG
CCTCTATGCCCAGCATCTTGCCGAACAGGGCTACATCACGATCGCCATGGACGCCGCGTATCAGGGCGGCAGCGGCGGCG
AGCCGCGCAGCGTGGACAAGCCCCAGTACCGCATCGAGGACATTCACGGCGCGGCGGACTTCCTCACCCAGTATCCGGGC
GTCGATGCGGCGCGTCTCGGCCTGCTCGGCATTTGCGGCGGCGGCGGATACGCCTTGTCGGCGGCGAAGTCCGACAAACG
CTTTGTGTCGATCGCAACGCTGAGCATGTTCAATTCCGGTCGCGTTCGCCGCAACGGCTTCGAAGATTCGCAACTGGAGA
CGATCCAGGAACGGTTGCAGCAGGCTTCGGAGGCCCGCGCCCAGGAAAAGGCCGGAGGCGAAGTCCTCTACTCGGGCGAT
GCCGACATGACGGACGAAGAGATCGCCGCTCTGCCCTTCGAGATGTATCGCCAGGGTTACGAATATTACTGGCGCACGCA
CGCCCATGAGGGATCGACCTTCCGCTACACCACGAGCAGCCTGCTCGATCTGATGCGCTGGGATGCCACCGACCAGATCG
ACATGATCGACCAGCCTCTCCTGATGATCGCCGGCAGCGCGGCCGACAGCCTCTATATGACCGAAGATGCCTACGAGAAG
GCGACGGGCACAACCGACAAGGAACTGTTCACAATCGAGGGTGCAACGCACATCGAGACCTACTGGGTGCCTGAGTATGT
CGAAGCCGCCATGGGCAAGCTGACGACATTCTTCGGACGGACGCTCGACGCCGATCGCTCCTGA

Upstream 100 bases:

>100_bases
CAGGTATCGCAGTTCCTTGCCGATAAGGACCTGGACTGATCGCCTGCGCTCGTGCCGGCACGGCACGGGCACCCCTCGAA
ATCGAACAATGGAGCCTGAA

Downstream 100 bases:

>100_bases
TCCCGGCTTGCCGTGTCCGGCGTTGCTGCGCCGGGCACGGTCATCATCATCAACGATGTGCCATCGATCGCGCAGCGGAC
CACGGCCCGCATGTCGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSGETIDRKRREFLGTSALVLSAAMTGVLTMTSANAVASENPFTLVYRGAITENVPGQFNIHPVNYDLNGLDIVANVYTP
ADYDPDQQYPAIVVAHPNGGVKEQVAGLYAQHLAEQGYITIAMDAAYQGGSGGEPRSVDKPQYRIEDIHGAADFLTQYPG
VDAARLGLLGICGGGGYALSAAKSDKRFVSIATLSMFNSGRVRRNGFEDSQLETIQERLQQASEARAQEKAGGEVLYSGD
ADMTDEEIAALPFEMYRQGYEYYWRTHAHEGSTFRYTTSSLLDLMRWDATDQIDMIDQPLLMIAGSAADSLYMTEDAYEK
ATGTTDKELFTIEGATHIETYWVPEYVEAAMGKLTTFFGRTLDADRS

Sequences:

>Translated_367_residues
MSGETIDRKRREFLGTSALVLSAAMTGVLTMTSANAVASENPFTLVYRGAITENVPGQFNIHPVNYDLNGLDIVANVYTP
ADYDPDQQYPAIVVAHPNGGVKEQVAGLYAQHLAEQGYITIAMDAAYQGGSGGEPRSVDKPQYRIEDIHGAADFLTQYPG
VDAARLGLLGICGGGGYALSAAKSDKRFVSIATLSMFNSGRVRRNGFEDSQLETIQERLQQASEARAQEKAGGEVLYSGD
ADMTDEEIAALPFEMYRQGYEYYWRTHAHEGSTFRYTTSSLLDLMRWDATDQIDMIDQPLLMIAGSAADSLYMTEDAYEK
ATGTTDKELFTIEGATHIETYWVPEYVEAAMGKLTTFFGRTLDADRS
>Mature_366_residues
SGETIDRKRREFLGTSALVLSAAMTGVLTMTSANAVASENPFTLVYRGAITENVPGQFNIHPVNYDLNGLDIVANVYTPA
DYDPDQQYPAIVVAHPNGGVKEQVAGLYAQHLAEQGYITIAMDAAYQGGSGGEPRSVDKPQYRIEDIHGAADFLTQYPGV
DAARLGLLGICGGGGYALSAAKSDKRFVSIATLSMFNSGRVRRNGFEDSQLETIQERLQQASEARAQEKAGGEVLYSGDA
DMTDEEIAALPFEMYRQGYEYYWRTHAHEGSTFRYTTSSLLDLMRWDATDQIDMIDQPLLMIAGSAADSLYMTEDAYEKA
TGTTDKELFTIEGATHIETYWVPEYVEAAMGKLTTFFGRTLDADRS

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI221142683, Length=296, Percent_Identity=39.8648648648649, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 40204; Mature: 40073

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGETIDRKRREFLGTSALVLSAAMTGVLTMTSANAVASENPFTLVYRGAITENVPGQFN
CCCCCHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCCCCEE
IHPVNYDLNGLDIVANVYTPADYDPDQQYPAIVVAHPNGGVKEQVAGLYAQHLAEQGYIT
EEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
IAMDAAYQGGSGGEPRSVDKPQYRIEDIHGAADFLTQYPGVDAARLGLLGICGGGGYALS
EEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHCEEEEECCCCEEEE
AAKSDKRFVSIATLSMFNSGRVRRNGFEDSQLETIQERLQQASEARAQEKAGGEVLYSGD
CCCCCCEEEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
ADMTDEEIAALPFEMYRQGYEYYWRTHAHEGSTFRYTTSSLLDLMRWDATDQIDMIDQPL
CCCCHHHHHHCCHHHHHCCHHEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHCCCCE
LMIAGSAADSLYMTEDAYEKATGTTDKELFTIEGATHIETYWVPEYVEAAMGKLTTFFGR
EEEECCCCCCEEECHHHHHHHCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCC
TLDADRS
CCCCCCC
>Mature Secondary Structure 
SGETIDRKRREFLGTSALVLSAAMTGVLTMTSANAVASENPFTLVYRGAITENVPGQFN
CCCCHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCCCCEE
IHPVNYDLNGLDIVANVYTPADYDPDQQYPAIVVAHPNGGVKEQVAGLYAQHLAEQGYIT
EEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
IAMDAAYQGGSGGEPRSVDKPQYRIEDIHGAADFLTQYPGVDAARLGLLGICGGGGYALS
EEEECCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHCEEEEECCCCEEEE
AAKSDKRFVSIATLSMFNSGRVRRNGFEDSQLETIQERLQQASEARAQEKAGGEVLYSGD
CCCCCCEEEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
ADMTDEEIAALPFEMYRQGYEYYWRTHAHEGSTFRYTTSSLLDLMRWDATDQIDMIDQPL
CCCCHHHHHHCCHHHHHCCHHEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHCCCCE
LMIAGSAADSLYMTEDAYEKATGTTDKELFTIEGATHIETYWVPEYVEAAMGKLTTFFGR
EEEECCCCCCEEECHHHHHHHCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCC
TLDADRS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]