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The map label for this gene is ygjK [C]

Identifier: 110636016

GI number: 110636016

Start: 3980327

End: 3982531

Strand: Reverse

Name: ygjK [C]

Synonym: Meso_3691

Alternate gene names: 110636016

Gene position: 3982531-3980327 (Counterclockwise)

Preceding gene: 110636017

Following gene: 110636012

Centisome position: 90.26

GC content: 60.32

Gene sequence:

>2205_bases
ATGGACGACCGTATCGACCCGCTCGCGCCCAACCCCGACGAATACGCGACGGCACGCACACCACAATTCTTCATCGCAGC
CACCGCTCCGCTACAGGAGCGGCGGCCGCGAACGCAGAAGCACGACGATACCTTCTCCATGTTCGATCACAATGGAGATG
CGCTTTCGGGGCCGGGCAGCCCCGAGGGCATTTTTCATCGCGACACGCGCTACCTGTCACACTTCTTCCTCACCATCGGT
GGGGAGCGCCCGCTGCTTCTCAGTTCGATGTTGCGCGATGACAACGCACTGCTGACCTTCGATCTTGCCAATCCGGATCT
TTACGAGAACGGCGTCATCACGCTTCAGCACGATCTCATCCATATCAGGCGAACGCGCTTTCTTTGGAAGGCCGCCTGTT
ATGAGCGGATCAGCGTGCGCAATTACGATGAGCGCAGCCGGACGGTGCGTTTGGAGCTCGCTTTTGCCGCCGATTTTGCG
GATCTTTTCGAAGTGCGCGGAGCGCGCCGAAAGAAACGGGGCCGTACCCATGCCCCCGAGGTCGGAGCCGATAGGGTCAC
CCTTTCCTATAAGGGGCTCGATGGTGTTCTTCGCCGCACGATCATACGCTTCGACCCCGCGCCTGTAACGCTCACAGGAG
AGCAGGCGGTGTTTGAGGTGAAGCTGATGCCGCGCCAGACGCGTCAGCTTTTTGTCGAGATACTCTGCAATGAAGAACCG
CAGGAGTTCACTCCGCGCCGCCTCTTCTTTTCCAATCTTTTGGAAGCGCGGCGCGCCAACCGCGCTGCTGTCATGAATGC
CGCATCCGTTGCCACCTCCAACGATGTCTTCAACGAAGCGGTGCGCCGCGCCGTAGCGGACCTCTACATGCTGGTCACCG
ACACGGAAGACGGCCCCTACCCCTATGCCGGAATTCCGTGGTTCAGCACGGTCTTCGGGCGCGACGCGCTCATTACGGCG
CTGCAAACATTATGGCTTGATCCATCTATCGCCCGCGGCGTCTTGAAACATCTCGCTGCCAATCAGGCAACCGAGGAAAA
TCCCGCCGCCGATGCGGAACCAGGAAAGATTCTCCACGAGGTGCGCTATGGCGAGATGGCGGAACTGGGTGAGGTTCCCT
TCCGCCGCTATTACGGCAGCGTGGATGCTACGCCGCTCTTCGTGATGCTCGCCGGGGCCTATCTCGATCGCACCGGAGAT
CTGGAAACCTTGAAATCGCTCTGGCCGAATATCGAGGCGGCGCTTTCCTGGATTGAGGAATATGGCGACCGGGACGGCGA
CGGTTTCGTGGAATATGGCCGCCGTACGCTGGAAGGCCTCGCCAATCAAGGCTGGAAGGATAGCTTCGACGCGATTTTCC
ATGCCGACGGCAAATTGGCAGTTGGGCCGATCACGGTCTGCGAGGTCCAAGCCTATGTCTATGGTGCATGGACTGCCGCC
GCCAAAATAGCCGCGGCCATGGGGCAGCCACGACGCTCACTCGAATTCGAGACGAAAGCCAAGGAGCTTCGCGCCCGCTT
CGACAGCGCATTTTTCGATGAGGAACTCGGCACATATGTGCTGGCGCTCGACGGCAGCAACAAACCCTGCCGCGTACGGG
CGTCGAATGCGGGCCACACGCTCTTCACCGGAATCGCCTATCCCCACCGCGCAACAAGGGTCGTAACAACTCTCATGGAC
CGCTCCTCCTTCTCAGGATGGGGTATACGCACGGTGGCGACCACCGAGTCCCGTTACAATCCCATGAGTTACCACAATGG
GTCGGTCTGGCCGCACGATAACGCGCTGATCGCGGCAGGGTTCGCCCGCTATGGCTACCGCGCCGAAGCCGTGCGTGTTT
TCGAGGGGTTGTTCATGGCTTCTACCTATATCGACCTGCGGCGGCTGCCGGAACTTTTCTGCGGCTTTCCTCGCCAGAGA
AGCCGCGGCCCGACCTTTTATCCGGTCGCCTGCTCTCCCCAAGCCTGGGCGGCCGTAACGCCGCTCTCGATCCTGCAGTC
TTGCCTTGGAATGAGTTTTGACCCCAGTTCGGGAACGCTACTCTTCCACCAGCCGATGCTGCCGGAGTTTTTGGACGAAG
TTACGCTTCGCGGCATAAGGCTTCCCCAGGGCCGGCTGGATATGTTCTTGCGGCGAGCCGGAGACGAAGTGGTGGTGCAG
GTGCTTGACCGCGAGGGCGACACGCGCGTCACCACCACATATTGA

Upstream 100 bases:

>100_bases
ATACGAGAGGTTACTGCATCACCGGATGCGAACCGTCCCGTTCCCGGCCGAAGTGGTCGGCATCCAGACGGTCGCTTGAT
CCCGCTTCGGGGAGGCAAAC

Downstream 100 bases:

>100_bases
GATAAGGCGCCCGGCTGTCTTTCTTTCCGGGGAAGAGGGCCGGGGGCATCATCAAAGGCCAAGAAACGGCTGGAAGCCAC
CGAAGATCAGTCGTTTCCCA

Product: Amylo-alpha-1,6-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Glycoside Hydrolase Family; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MDDRIDPLAPNPDEYATARTPQFFIAATAPLQERRPRTQKHDDTFSMFDHNGDALSGPGSPEGIFHRDTRYLSHFFLTIG
GERPLLLSSMLRDDNALLTFDLANPDLYENGVITLQHDLIHIRRTRFLWKAACYERISVRNYDERSRTVRLELAFAADFA
DLFEVRGARRKKRGRTHAPEVGADRVTLSYKGLDGVLRRTIIRFDPAPVTLTGEQAVFEVKLMPRQTRQLFVEILCNEEP
QEFTPRRLFFSNLLEARRANRAAVMNAASVATSNDVFNEAVRRAVADLYMLVTDTEDGPYPYAGIPWFSTVFGRDALITA
LQTLWLDPSIARGVLKHLAANQATEENPAADAEPGKILHEVRYGEMAELGEVPFRRYYGSVDATPLFVMLAGAYLDRTGD
LETLKSLWPNIEAALSWIEEYGDRDGDGFVEYGRRTLEGLANQGWKDSFDAIFHADGKLAVGPITVCEVQAYVYGAWTAA
AKIAAAMGQPRRSLEFETKAKELRARFDSAFFDEELGTYVLALDGSNKPCRVRASNAGHTLFTGIAYPHRATRVVTTLMD
RSSFSGWGIRTVATTESRYNPMSYHNGSVWPHDNALIAAGFARYGYRAEAVRVFEGLFMASTYIDLRRLPELFCGFPRQR
SRGPTFYPVACSPQAWAAVTPLSILQSCLGMSFDPSSGTLLFHQPMLPEFLDEVTLRGIRLPQGRLDMFLRRAGDEVVVQ
VLDREGDTRVTTTY

Sequences:

>Translated_734_residues
MDDRIDPLAPNPDEYATARTPQFFIAATAPLQERRPRTQKHDDTFSMFDHNGDALSGPGSPEGIFHRDTRYLSHFFLTIG
GERPLLLSSMLRDDNALLTFDLANPDLYENGVITLQHDLIHIRRTRFLWKAACYERISVRNYDERSRTVRLELAFAADFA
DLFEVRGARRKKRGRTHAPEVGADRVTLSYKGLDGVLRRTIIRFDPAPVTLTGEQAVFEVKLMPRQTRQLFVEILCNEEP
QEFTPRRLFFSNLLEARRANRAAVMNAASVATSNDVFNEAVRRAVADLYMLVTDTEDGPYPYAGIPWFSTVFGRDALITA
LQTLWLDPSIARGVLKHLAANQATEENPAADAEPGKILHEVRYGEMAELGEVPFRRYYGSVDATPLFVMLAGAYLDRTGD
LETLKSLWPNIEAALSWIEEYGDRDGDGFVEYGRRTLEGLANQGWKDSFDAIFHADGKLAVGPITVCEVQAYVYGAWTAA
AKIAAAMGQPRRSLEFETKAKELRARFDSAFFDEELGTYVLALDGSNKPCRVRASNAGHTLFTGIAYPHRATRVVTTLMD
RSSFSGWGIRTVATTESRYNPMSYHNGSVWPHDNALIAAGFARYGYRAEAVRVFEGLFMASTYIDLRRLPELFCGFPRQR
SRGPTFYPVACSPQAWAAVTPLSILQSCLGMSFDPSSGTLLFHQPMLPEFLDEVTLRGIRLPQGRLDMFLRRAGDEVVVQ
VLDREGDTRVTTTY
>Mature_734_residues
MDDRIDPLAPNPDEYATARTPQFFIAATAPLQERRPRTQKHDDTFSMFDHNGDALSGPGSPEGIFHRDTRYLSHFFLTIG
GERPLLLSSMLRDDNALLTFDLANPDLYENGVITLQHDLIHIRRTRFLWKAACYERISVRNYDERSRTVRLELAFAADFA
DLFEVRGARRKKRGRTHAPEVGADRVTLSYKGLDGVLRRTIIRFDPAPVTLTGEQAVFEVKLMPRQTRQLFVEILCNEEP
QEFTPRRLFFSNLLEARRANRAAVMNAASVATSNDVFNEAVRRAVADLYMLVTDTEDGPYPYAGIPWFSTVFGRDALITA
LQTLWLDPSIARGVLKHLAANQATEENPAADAEPGKILHEVRYGEMAELGEVPFRRYYGSVDATPLFVMLAGAYLDRTGD
LETLKSLWPNIEAALSWIEEYGDRDGDGFVEYGRRTLEGLANQGWKDSFDAIFHADGKLAVGPITVCEVQAYVYGAWTAA
AKIAAAMGQPRRSLEFETKAKELRARFDSAFFDEELGTYVLALDGSNKPCRVRASNAGHTLFTGIAYPHRATRVVTTLMD
RSSFSGWGIRTVATTESRYNPMSYHNGSVWPHDNALIAAGFARYGYRAEAVRVFEGLFMASTYIDLRRLPELFCGFPRQR
SRGPTFYPVACSPQAWAAVTPLSILQSCLGMSFDPSSGTLLFHQPMLPEFLDEVTLRGIRLPQGRLDMFLRRAGDEVVVQ
VLDREGDTRVTTTY

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82463; Mature: 82463

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRIDPLAPNPDEYATARTPQFFIAATAPLQERRPRTQKHDDTFSMFDHNGDALSGPGS
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
PEGIFHRDTRYLSHFFLTIGGERPLLLSSMLRDDNALLTFDLANPDLYENGVITLQHDLI
CCCCEEHHHHHHHHHHEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEHHHH
HIRRTRFLWKAACYERISVRNYDERSRTVRLELAFAADFADLFEVRGARRKKRGRTHAPE
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
VGADRVTLSYKGLDGVLRRTIIRFDPAPVTLTGEQAVFEVKLMPRQTRQLFVEILCNEEP
CCCCEEEEEECCHHHHHHHHHHEECCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCC
QEFTPRRLFFSNLLEARRANRAAVMNAASVATSNDVFNEAVRRAVADLYMLVTDTEDGPY
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCCC
PYAGIPWFSTVFGRDALITALQTLWLDPSIARGVLKHLAANQATEENPAADAEPGKILHE
CCCCCCHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
VRYGEMAELGEVPFRRYYGSVDATPLFVMLAGAYLDRTGDLETLKSLWPNIEAALSWIEE
HHCCCHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH
YGDRDGDGFVEYGRRTLEGLANQGWKDSFDAIFHADGKLAVGPITVCEVQAYVYGAWTAA
HCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCEEECCEEEEEEEEHEEEHHHHH
AKIAAAMGQPRRSLEFETKAKELRARFDSAFFDEELGTYVLALDGSNKPCRVRASNAGHT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCE
LFTGIAYPHRATRVVTTLMDRSSFSGWGIRTVATTESRYNPMSYHNGSVWPHDNALIAAG
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEH
FARYGYRAEAVRVFEGLFMASTYIDLRRLPELFCGFPRQRSRGPTFYPVACSPQAWAAVT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHCC
PLSILQSCLGMSFDPSSGTLLFHQPMLPEFLDEVTLRGIRLPQGRLDMFLRRAGDEVVVQ
HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH
VLDREGDTRVTTTY
HHCCCCCCEEEECC
>Mature Secondary Structure
MDDRIDPLAPNPDEYATARTPQFFIAATAPLQERRPRTQKHDDTFSMFDHNGDALSGPGS
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
PEGIFHRDTRYLSHFFLTIGGERPLLLSSMLRDDNALLTFDLANPDLYENGVITLQHDLI
CCCCEEHHHHHHHHHHEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEHHHH
HIRRTRFLWKAACYERISVRNYDERSRTVRLELAFAADFADLFEVRGARRKKRGRTHAPE
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
VGADRVTLSYKGLDGVLRRTIIRFDPAPVTLTGEQAVFEVKLMPRQTRQLFVEILCNEEP
CCCCEEEEEECCHHHHHHHHHHEECCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCC
QEFTPRRLFFSNLLEARRANRAAVMNAASVATSNDVFNEAVRRAVADLYMLVTDTEDGPY
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCCC
PYAGIPWFSTVFGRDALITALQTLWLDPSIARGVLKHLAANQATEENPAADAEPGKILHE
CCCCCCHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
VRYGEMAELGEVPFRRYYGSVDATPLFVMLAGAYLDRTGDLETLKSLWPNIEAALSWIEE
HHCCCHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH
YGDRDGDGFVEYGRRTLEGLANQGWKDSFDAIFHADGKLAVGPITVCEVQAYVYGAWTAA
HCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCEEECCEEEEEEEEHEEEHHHHH
AKIAAAMGQPRRSLEFETKAKELRARFDSAFFDEELGTYVLALDGSNKPCRVRASNAGHT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCE
LFTGIAYPHRATRVVTTLMDRSSFSGWGIRTVATTESRYNPMSYHNGSVWPHDNALIAAG
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEH
FARYGYRAEAVRVFEGLFMASTYIDLRRLPELFCGFPRQRSRGPTFYPVACSPQAWAAVT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHCC
PLSILQSCLGMSFDPSSGTLLFHQPMLPEFLDEVTLRGIRLPQGRLDMFLRRAGDEVVVQ
HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH
VLDREGDTRVTTTY
HHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA