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The map label for this gene is ntaR [H]

Identifier: 110632927

GI number: 110632927

Start: 628311

End: 629501

Strand: Direct

Name: ntaR [H]

Synonym: Meso_0568

Alternate gene names: 110632927

Gene position: 628311-629501 (Clockwise)

Preceding gene: 110632914

Following gene: 110632930

Centisome position: 14.24

GC content: 55.92

Gene sequence:

>1191_bases
ATGAAAATTGAAGGCAAGGGGACAGATTTGAGTGTGAAGCGGCGGCCGTTGGCCGAAACCGTCCGAGAGCAGATCTCAAA
CATAATTTTGAACGGGGAACTGAAGCCGGGAGACAAACTGAACGAGATGGAGATCGCTGGGCGCCTCGAGGTCAGCAGGG
GCCCCGTGCGTGAGGCGGCAAGGCAGCTGGAGGAGATGGGTCTCCTGGAAACGCATGCCTTCCGTGGCTCATACGTGAAG
AAGTTCAGCCAGAGAGAGGTTGCCGACATCTACAGCTTGCGTGAGATTCTCGAATCCACCGCAGCGCTCGAAGCTGTACG
ATTGGCGACGCCCAGCGATCTGAACGCCATCGAAGTTGCAATGCGCGACACTGAAACGGCCGCACTCTCGAATTCACGCA
GTCGAATGATGGAATCCGATGCCGCATTTCATACAGCACTTTGCCGTGCCGGCAAGAACGATAGGATCACTGAAACCTTC
AAGAGACTGGCGACCGAACTGCGATTGGTGCACCTGATGATGAGCCCGAACCCCGAGCAGCTGAGAGCCGCGGCGTTGGA
CCATGCGGCGATCCTACGCGCATTGCGGAGTCGGAACGCACAACATGTGGTCGACGCTCTGCGTAGCCATATTACTGGCG
AGCGCGATGTCGTCCTGCAATACCTGGCCCCCCATGGAAGCAATACAGGATCGTCGGTTTCGCCCAGGGGAGTCGACGGT
CCCCAAGAGACCCGGTTCACGGGCAAGATCATAATCAGCAGGCACTCGGCGAAAGACTACCCGCTTTTGGCGCGGATGAA
TCGCGAATTGGCTGACGATGAAGGTCACCGCAATCCAATGACGGTAGCGCAAATGGAGGAGCGATTCCGCCACTTTGTAA
ACAAAGAGGGTTGGAGTGTCGATCTATTTAAGGTCGGCGACGAGATTGTTGGCTACGCCACACATCGCCGCGACAATGAC
CCCACCAATCCCAACCGTCAGTGCGTATTTCTGAAGCAGTTCTACATTGTGCGCCACTATCGGCGAGACAATTTTGGAAA
GGCAGCGTTCGATGCACTAGCTGCCGCCAGATTCCAGGAAGGCGAACGTGTTGTTCTCGAGGTGATCGAAAACAATCCTG
GCGGCAGGGTGTTCTGGATGCGGGTTGGCTTCACGCCATACAGTTCAATGCTCGAGTACATCCACCAATAA

Upstream 100 bases:

>100_bases
CCGATGGAGAGAGCTTGGTTCGAAGTCGTTAAATTGTCAACAATAAAAACTTTGCAAAATTACGGCGTAGCGCATAAATG
GCTGAAGGGAGTGGATCGCC

Downstream 100 bases:

>100_bases
TCCTGCGTCAGAGCGATCTCGTCTGCGTGTGCCGTGATATCCTCGGGAAGGATGCTCACCCTTCGAGATCTGAGCGAGAT
ACGTCTTCGCGGTCGCGCGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKIEGKGTDLSVKRRPLAETVREQISNIILNGELKPGDKLNEMEIAGRLEVSRGPVREAARQLEEMGLLETHAFRGSYVK
KFSQREVADIYSLREILESTAALEAVRLATPSDLNAIEVAMRDTETAALSNSRSRMMESDAAFHTALCRAGKNDRITETF
KRLATELRLVHLMMSPNPEQLRAAALDHAAILRALRSRNAQHVVDALRSHITGERDVVLQYLAPHGSNTGSSVSPRGVDG
PQETRFTGKIIISRHSAKDYPLLARMNRELADDEGHRNPMTVAQMEERFRHFVNKEGWSVDLFKVGDEIVGYATHRRDND
PTNPNRQCVFLKQFYIVRHYRRDNFGKAAFDALAAARFQEGERVVLEVIENNPGGRVFWMRVGFTPYSSMLEYIHQ

Sequences:

>Translated_396_residues
MKIEGKGTDLSVKRRPLAETVREQISNIILNGELKPGDKLNEMEIAGRLEVSRGPVREAARQLEEMGLLETHAFRGSYVK
KFSQREVADIYSLREILESTAALEAVRLATPSDLNAIEVAMRDTETAALSNSRSRMMESDAAFHTALCRAGKNDRITETF
KRLATELRLVHLMMSPNPEQLRAAALDHAAILRALRSRNAQHVVDALRSHITGERDVVLQYLAPHGSNTGSSVSPRGVDG
PQETRFTGKIIISRHSAKDYPLLARMNRELADDEGHRNPMTVAQMEERFRHFVNKEGWSVDLFKVGDEIVGYATHRRDND
PTNPNRQCVFLKQFYIVRHYRRDNFGKAAFDALAAARFQEGERVVLEVIENNPGGRVFWMRVGFTPYSSMLEYIHQ
>Mature_396_residues
MKIEGKGTDLSVKRRPLAETVREQISNIILNGELKPGDKLNEMEIAGRLEVSRGPVREAARQLEEMGLLETHAFRGSYVK
KFSQREVADIYSLREILESTAALEAVRLATPSDLNAIEVAMRDTETAALSNSRSRMMESDAAFHTALCRAGKNDRITETF
KRLATELRLVHLMMSPNPEQLRAAALDHAAILRALRSRNAQHVVDALRSHITGERDVVLQYLAPHGSNTGSSVSPRGVDG
PQETRFTGKIIISRHSAKDYPLLARMNRELADDEGHRNPMTVAQMEERFRHFVNKEGWSVDLFKVGDEIVGYATHRRDND
PTNPNRQCVFLKQFYIVRHYRRDNFGKAAFDALAAARFQEGERVVLEVIENNPGGRVFWMRVGFTPYSSMLEYIHQ

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=202, Percent_Identity=30.6930693069307, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789353, Length=223, Percent_Identity=28.6995515695067, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 44811; Mature: 44811

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEGKGTDLSVKRRPLAETVREQISNIILNGELKPGDKLNEMEIAGRLEVSRGPVREAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCEEECCCCHHHHHH
RQLEEMGLLETHAFRGSYVKKFSQREVADIYSLREILESTAALEAVRLATPSDLNAIEVA
HHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
MRDTETAALSNSRSRMMESDAAFHTALCRAGKNDRITETFKRLATELRLVHLMMSPNPEQ
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LRAAALDHAAILRALRSRNAQHVVDALRSHITGERDVVLQYLAPHGSNTGSSVSPRGVDG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PQETRFTGKIIISRHSAKDYPLLARMNRELADDEGHRNPMTVAQMEERFRHFVNKEGWSV
CHHCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
DLFKVGDEIVGYATHRRDNDPTNPNRQCVFLKQFYIVRHYRRDNFGKAAFDALAAARFQE
EHEECCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
GERVVLEVIENNPGGRVFWMRVGFTPYSSMLEYIHQ
CCCEEHHHHHCCCCCEEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure
MKIEGKGTDLSVKRRPLAETVREQISNIILNGELKPGDKLNEMEIAGRLEVSRGPVREAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCEEECCCCHHHHHH
RQLEEMGLLETHAFRGSYVKKFSQREVADIYSLREILESTAALEAVRLATPSDLNAIEVA
HHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
MRDTETAALSNSRSRMMESDAAFHTALCRAGKNDRITETFKRLATELRLVHLMMSPNPEQ
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LRAAALDHAAILRALRSRNAQHVVDALRSHITGERDVVLQYLAPHGSNTGSSVSPRGVDG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PQETRFTGKIIISRHSAKDYPLLARMNRELADDEGHRNPMTVAQMEERFRHFVNKEGWSV
CHHCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
DLFKVGDEIVGYATHRRDNDPTNPNRQCVFLKQFYIVRHYRRDNFGKAAFDALAAARFQE
EHEECCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
GERVVLEVIENNPGGRVFWMRVGFTPYSSMLEYIHQ
CCCEEHHHHHCCCCCEEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA