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The map label for this gene is 110632906

Identifier: 110632906

GI number: 110632906

Start: 606314

End: 608023

Strand: Direct

Name: 110632906

Synonym: Meso_0546

Alternate gene names: NA

Gene position: 606314-608023 (Clockwise)

Preceding gene: 110632905

Following gene: 110632907

Centisome position: 13.74

GC content: 60.47

Gene sequence:

>1710_bases
ATGAAACTGGAGCTGTGCGACAAGCGAAAGGCGATCATCGCGCAGACCGGGCACCTGCTGGTGCTCGGTGGACCGGGCTC
AGGCAAGACGACGATCGCGCTTTTCAAGGCACAAGGCCGCTTCGCGACGCTCAAGCCCGGTCAGGAAGTTCTGTTCCTGA
GCTTCTCTCGCGCGGCGATCCGTCAGGTCCTCCTACGCTGCAAAGAAATCCTGACGCCGAGCCAGCGCCGGGCCGTCGTG
GTCCAGACCTACCACGCTTTCTGCATGGAGATGCTGGAAGCACATGGGCGGCTGTTGCATGGGCGGTCGGTGCGTTTTCT
TTACCCTGGCGAGGAACGGCTTCAGAAGTCCGCGTTCGACGGGGACTGGAGTGTCGAGCGCAAGCGTCAGGCAGCAGAAA
TGGGGCTTTATTGCTTTGACCTATTTGCGGCGGGCACGGCCGATCTGCTCGAAGGCTGCGCGGCGCTACGCGGGCTAGTC
GCTGATCGGTTCCCAATGATTATCGTCGATGAGTTCCAGGACACCGACGATAATCAGTGGCGGATCGTGCGGGCGCTCGC
CCAAGTGACCGACGTATTCTGTCTGGCGGATCCGGAGCAGCGGATCTTCGATTATCGGGACGACATCGATCCTCGCCGGC
TGGACATTCTGCGCGAGGCTGTCGCGATCGCCGAATTCGATCTCGGTGGCGAAAACCACAGGAGTCCGAACGCCGGCATC
CTCCATTTTGCCGATGCGGTGTTGCGTAATCAAGGTCCGCTGCCGGTGACACCTGACGTCAAACAGGTGAGCTATTGGGG
GAACGCTTTCTCCGCGACGGTTCATGCGGCGGTAATCTGGACTTTCAGTGCGTTGCGAAGAAAAGGTGTCGAGAAGCCGA
GTGTCGCGGTGCTGTCGCGGAGCAACTCGCTGATCTCTGACCTTTCGGTTATCCTTTCCGAGCCTCACACCTACAACAAC
CAGCTGCTCTCCGTCATTGAGCATGATGTCGTGTGGGATGCGGAGCTATCGGCTGCGGCGGCAATCGTGGTCGCATCGAT
CCTGGAGTGGCCGACGGGGCTGGCCGCGGAGAGCTTGGCGCGGACGCTTCTGGCGATCGCCGGCTTCTACAAGCTGAAGA
ACGCGGAAGAGCAAACCAACACGGCAGCCGAGAACGCTCGCAAATATGACGAGGCTGCGGCCAAGGTGGCGAAGGGTGAG
GAACCGCGGATCAAAGCCGCGAAGGCATTGGTCGCCGCTCATGCAGCCGGTGTCGCGTTGATCGGCGAGCCGGTGGCGGA
CTGGAAGGTGGCGCGTCGCCTGCTTCAGGACATCCCTGCGCTCAGCGAATTATTCCGCGAAGTGCGGCTTGTCCGCCTCT
TCAGGGCGACGGATGCCCTGGCATCGGGCCTTAGTGAACGCTGGCTTGCATCAGGCAGTTACCGGGGTGCGAGTGACCTC
GTGAAGCGCATCCTTGAACAGGAGCGGCTCATCGCTGCCGAGCGCGATTCACAGTTCGGCTGCATTCTGATGAATATGCA
CAAGGCCAAAGGCAAAGAGTTCGATGGCGTGGTGCTTGTTGAAGGTGCCTTCAAGTCGGGGTTCTTTGACGAAAGGACTG
AGCAACCCCCATTTGAGCGCAGCCGCCGGTTATTGCGAGTGGGTTTGACGCGGGCGCGGACACTGGTGACGATTGTTCGA
CCTCAAAATGCGAGGCCTTTGGTCGACTAG

Upstream 100 bases:

>100_bases
CGACGATCCGCGAGATCCTGGAGGCGATTCATAAGACCCTCAGCGCCATGCCCGAAGAGATTGCCGCACCTGTGCCCGGC
GATTTCGAGGACTTGCCGGG

Downstream 100 bases:

>100_bases
GCTCTTCACGTCCAAGCGGCCGATAATCTGAAGAAGGTGTCCATGGCGAGGCTCACCCTCAACTACGTCTGGAAGCAGAA
GACCACGCCAGTCATCCTGC

Product: UvrD/REP helicase

Products: NA

Alternate protein names: Helicase UvrD/REP Family; ATP-Dependent DNA Helicase; DNA Helicase

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKLELCDKRKAIIAQTGHLLVLGGPGSGKTTIALFKAQGRFATLKPGQEVLFLSFSRAAIRQVLLRCKEILTPSQRRAVV
VQTYHAFCMEMLEAHGRLLHGRSVRFLYPGEERLQKSAFDGDWSVERKRQAAEMGLYCFDLFAAGTADLLEGCAALRGLV
ADRFPMIIVDEFQDTDDNQWRIVRALAQVTDVFCLADPEQRIFDYRDDIDPRRLDILREAVAIAEFDLGGENHRSPNAGI
LHFADAVLRNQGPLPVTPDVKQVSYWGNAFSATVHAAVIWTFSALRRKGVEKPSVAVLSRSNSLISDLSVILSEPHTYNN
QLLSVIEHDVVWDAELSAAAAIVVASILEWPTGLAAESLARTLLAIAGFYKLKNAEEQTNTAAENARKYDEAAAKVAKGE
EPRIKAAKALVAAHAAGVALIGEPVADWKVARRLLQDIPALSELFREVRLVRLFRATDALASGLSERWLASGSYRGASDL
VKRILEQERLIAAERDSQFGCILMNMHKAKGKEFDGVVLVEGAFKSGFFDERTEQPPFERSRRLLRVGLTRARTLVTIVR
PQNARPLVD

Sequences:

>Translated_569_residues
MKLELCDKRKAIIAQTGHLLVLGGPGSGKTTIALFKAQGRFATLKPGQEVLFLSFSRAAIRQVLLRCKEILTPSQRRAVV
VQTYHAFCMEMLEAHGRLLHGRSVRFLYPGEERLQKSAFDGDWSVERKRQAAEMGLYCFDLFAAGTADLLEGCAALRGLV
ADRFPMIIVDEFQDTDDNQWRIVRALAQVTDVFCLADPEQRIFDYRDDIDPRRLDILREAVAIAEFDLGGENHRSPNAGI
LHFADAVLRNQGPLPVTPDVKQVSYWGNAFSATVHAAVIWTFSALRRKGVEKPSVAVLSRSNSLISDLSVILSEPHTYNN
QLLSVIEHDVVWDAELSAAAAIVVASILEWPTGLAAESLARTLLAIAGFYKLKNAEEQTNTAAENARKYDEAAAKVAKGE
EPRIKAAKALVAAHAAGVALIGEPVADWKVARRLLQDIPALSELFREVRLVRLFRATDALASGLSERWLASGSYRGASDL
VKRILEQERLIAAERDSQFGCILMNMHKAKGKEFDGVVLVEGAFKSGFFDERTEQPPFERSRRLLRVGLTRARTLVTIVR
PQNARPLVD
>Mature_569_residues
MKLELCDKRKAIIAQTGHLLVLGGPGSGKTTIALFKAQGRFATLKPGQEVLFLSFSRAAIRQVLLRCKEILTPSQRRAVV
VQTYHAFCMEMLEAHGRLLHGRSVRFLYPGEERLQKSAFDGDWSVERKRQAAEMGLYCFDLFAAGTADLLEGCAALRGLV
ADRFPMIIVDEFQDTDDNQWRIVRALAQVTDVFCLADPEQRIFDYRDDIDPRRLDILREAVAIAEFDLGGENHRSPNAGI
LHFADAVLRNQGPLPVTPDVKQVSYWGNAFSATVHAAVIWTFSALRRKGVEKPSVAVLSRSNSLISDLSVILSEPHTYNN
QLLSVIEHDVVWDAELSAAAAIVVASILEWPTGLAAESLARTLLAIAGFYKLKNAEEQTNTAAENARKYDEAAAKVAKGE
EPRIKAAKALVAAHAAGVALIGEPVADWKVARRLLQDIPALSELFREVRLVRLFRATDALASGLSERWLASGSYRGASDL
VKRILEQERLIAAERDSQFGCILMNMHKAKGKEFDGVVLVEGAFKSGFFDERTEQPPFERSRRLLRVGLTRARTLVTIVR
PQNARPLVD

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63035; Mature: 63035

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLELCDKRKAIIAQTGHLLVLGGPGSGKTTIALFKAQGRFATLKPGQEVLFLSFSRAAI
CCCCCCCCCHHHHCCCCCEEEEECCCCCCEEEEEEEECCCEEECCCCCEEEEEEHHHHHH
RQVLLRCKEILTPSQRRAVVVQTYHAFCMEMLEAHGRLLHGRSVRFLYPGEERLQKSAFD
HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCEECCCEEEEECCCHHHHHHHCCC
GDWSVERKRQAAEMGLYCFDLFAAGTADLLEGCAALRGLVADRFPMIIVDEFQDTDDNQW
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
RIVRALAQVTDVFCLADPEQRIFDYRDDIDPRRLDILREAVAIAEFDLGGENHRSPNAGI
HHHHHHHHHHHHHEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
LHFADAVLRNQGPLPVTPDVKQVSYWGNAFSATVHAAVIWTFSALRRKGVEKPSVAVLSR
HHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
SNSLISDLSVILSEPHTYNNQLLSVIEHDVVWDAELSAAAAIVVASILEWPTGLAAESLA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHH
RTLLAIAGFYKLKNAEEQTNTAAENARKYDEAAAKVAKGEEPRIKAAKALVAAHAAGVAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHE
IGEPVADWKVARRLLQDIPALSELFREVRLVRLFRATDALASGLSERWLASGSYRGASDL
ECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHH
VKRILEQERLIAAERDSQFGCILMNMHKAKGKEFDGVVLVEGAFKSGFFDERTEQPPFER
HHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHH
SRRLLRVGLTRARTLVTIVRPQNARPLVD
HHHHHHHHHHHHHEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKLELCDKRKAIIAQTGHLLVLGGPGSGKTTIALFKAQGRFATLKPGQEVLFLSFSRAAI
CCCCCCCCCHHHHCCCCCEEEEECCCCCCEEEEEEEECCCEEECCCCCEEEEEEHHHHHH
RQVLLRCKEILTPSQRRAVVVQTYHAFCMEMLEAHGRLLHGRSVRFLYPGEERLQKSAFD
HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCEECCCEEEEECCCHHHHHHHCCC
GDWSVERKRQAAEMGLYCFDLFAAGTADLLEGCAALRGLVADRFPMIIVDEFQDTDDNQW
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
RIVRALAQVTDVFCLADPEQRIFDYRDDIDPRRLDILREAVAIAEFDLGGENHRSPNAGI
HHHHHHHHHHHHHEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
LHFADAVLRNQGPLPVTPDVKQVSYWGNAFSATVHAAVIWTFSALRRKGVEKPSVAVLSR
HHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
SNSLISDLSVILSEPHTYNNQLLSVIEHDVVWDAELSAAAAIVVASILEWPTGLAAESLA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHH
RTLLAIAGFYKLKNAEEQTNTAAENARKYDEAAAKVAKGEEPRIKAAKALVAAHAAGVAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHE
IGEPVADWKVARRLLQDIPALSELFREVRLVRLFRATDALASGLSERWLASGSYRGASDL
ECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHH
VKRILEQERLIAAERDSQFGCILMNMHKAKGKEFDGVVLVEGAFKSGFFDERTEQPPFER
HHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHH
SRRLLRVGLTRARTLVTIVRPQNARPLVD
HHHHHHHHHHHHHEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA