| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632905
Identifier: 110632905
GI number: 110632905
Start: 604470
End: 606317
Strand: Direct
Name: 110632905
Synonym: Meso_0545
Alternate gene names: NA
Gene position: 604470-606317 (Clockwise)
Preceding gene: 110632904
Following gene: 110632906
Centisome position: 13.7
GC content: 60.71
Gene sequence:
>1848_bases ATGCGGGTACGACGCCTCAAGATCACGAATTTTAGGGGCGTCTCCCAAGGATGCATCGATTTTTCCGGCCATACGCTTCT TGTCGGCGGCAACAACGTCGGCAAATCGACAGTATGCGAAGCCCTCGACCTCGTATTGGGGCCGGAACGCCTCTTTCGCA GGCCGGTCGTTGACGAGCATGATTTTCACTGCGGACGATATTTAACTGAGGATGGAGCGCCCGTCGAAATACGCATTGAG GCTATTCTTGTCGATCTCTCCGAAGAGGCAACGCGTCGGTTCGGCGGGCATCTGCGGCGGTGGGACGATCAGGCCGGCAC TTTCATCGACGAGCGGGAAAATGGGCTCGACCAAGCCGACGCGCCTGGCGTGGTCTGGGCCCTGCCTTTGCTGTTCGTCG GCCGCTACGACCGGGACGAGGATGATTTCGTCGGGAATACCTTCTTCGACCATCCGACCAAGGAGCTGGATGCACTCGAC GAGGAGACCGAGATAAAGCTCGGCCAGGGACGCGTACCTTTCACGCGCGTTCACAAGCGGCTTTGCGGCTTTGTGTTTTT GCGGACCCTCCGGACGGGGTCCCGAGCGCTGAGCCTTCAGCGGGGGTCGTTACTCGATTCGGTCCTGAAGCTCGGCGGGT CTGGCGCAGTTGAGATGTGGCAGGACACTCTGGGCCGGCTGCAAGCGCTCGACCCCGCGATTGGTGAGATCGAGCAATTG AAGCAGATTCGTGCCGAAGTGCGTTCGCGCATGGGTCGCTTCGTCAATCTTGCGCCAGGCGATAACTCGACAGCGTTCTT CGCGTCGGACCTGACGCGCGAGCATCTGCGCGAGGTCGTGCGCCTTTTCATCGCAGCACAGCCGGGGCAGCATCTCGTGC CGTTCGGCCGGCTTGGCACTGGCTCGATCAATCTGTTGGTCTTTGCGCTGCTGACCTTCATCGCTGAGTTGAAGGACAAG CAGTCTGTGATCTTCGCGATGGAGGAGCCGGAGATTGCGCTGCCACCGCATACGCAGCGCCGCGTCACACGCTTCGTGCT GGCCGAGATGGGGCAATCTATCGTTACGTCGCATTCGCCCTATGTGATTGAGCAATTCGATGCATCGCAGATCGTCATCC TTAACCGCGACGAAGGTGGGGCGCTGACAGGCAAGCCAATCGACGCTCAGGCGGTTAAGCCAAAGACCTACCGGACGGAA CGGCGCCAGTTCGCCGAAGCGATCCTGAGCCGGGCGGTGCTGGTGGTTGAGGGCTCGACCGAGGCGTCGCTGTTTCCGGT CGCATCTTCGATCATGGAAGATTCGCTGCCGGCGGACTCTTACATGCATTTCGATCTTGCCGGCGTCAGCGTCTTCGACG CCGGCGCGGACAATGCAGTGCCGCGTCATGGCCCGATTTTCTCGGCTCTAGGCAAGCTCGCCTTCGGCTTTTACGACAAG CCGAACGCCGCGTTTGGTCAAGATTCCCTCGAAAAGCTGAAGAGCTACACGCAGGTCTGGGAGTCACCCGAGAAGGGAAT CGAGAACGTCCTTGTCAAGCAGATGCCGATCGCGGTCGTGCGGCGCTTTCTCAACGAGGTGAAAGATCGGTCCGATTATC CCGCTGTCGGGGCCTATGATCCGGCGGCCGGCGATGCCGACGCAGCGGCGTTGGCGACCAAAGTGCTTAAGGCTCGCAAG GGCGAGGCTTATGGCTATGCGGCGATGCTGATCGCGCAGTGCCAGACCGCGGCGGAACTGCCCGCGACGATCCGCGAGAT CCTGGAGGCGATTCATAAGACCCTCAGCGCCATGCCCGAAGAGATTGCCGCACCTGTGCCCGGCGATTTCGAGGACTTGC CGGGATGA
Upstream 100 bases:
>100_bases AGGAACGGGTCAAGTATGACGTGGTGACGAGTTACGAGAAGCTCATGGATATCGTGGGTCGCGCGACGGCCTGACGCCGG TATGAGTTGAGGGAGCAGCT
Downstream 100 bases:
>100_bases AACTGGAGCTGTGCGACAAGCGAAAGGCGATCATCGCGCAGACCGGGCACCTGCTGGTGCTCGGTGGACCGGGCTCAGGC AAGACGACGATCGCGCTTTT
Product: ATP-dependent OLD family endonuclease
Products: NA
Alternate protein names: ATP-Dependent OLD Family Endonuclease; Chromosome Partition Protein; Endonuclease
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEHDFHCGRYLTEDGAPVEIRIE AILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQADAPGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALD EETEIKLGQGRVPFTRVHKRLCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGTGSINLLVFALLTFIAELKDK QSVIFAMEEPEIALPPHTQRRVTRFVLAEMGQSIVTSHSPYVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTE RRQFAEAILSRAVLVVEGSTEASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALGKLAFGFYDK PNAAFGQDSLEKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFLNEVKDRSDYPAVGAYDPAAGDADAAALATKVLKARK GEAYGYAAMLIAQCQTAAELPATIREILEAIHKTLSAMPEEIAAPVPGDFEDLPG
Sequences:
>Translated_615_residues MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEHDFHCGRYLTEDGAPVEIRIE AILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQADAPGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALD EETEIKLGQGRVPFTRVHKRLCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGTGSINLLVFALLTFIAELKDK QSVIFAMEEPEIALPPHTQRRVTRFVLAEMGQSIVTSHSPYVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTE RRQFAEAILSRAVLVVEGSTEASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALGKLAFGFYDK PNAAFGQDSLEKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFLNEVKDRSDYPAVGAYDPAAGDADAAALATKVLKARK GEAYGYAAMLIAQCQTAAELPATIREILEAIHKTLSAMPEEIAAPVPGDFEDLPG >Mature_615_residues MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEHDFHCGRYLTEDGAPVEIRIE AILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQADAPGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALD EETEIKLGQGRVPFTRVHKRLCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGTGSINLLVFALLTFIAELKDK QSVIFAMEEPEIALPPHTQRRVTRFVLAEMGQSIVTSHSPYVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTE RRQFAEAILSRAVLVVEGSTEASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALGKLAFGFYDK PNAAFGQDSLEKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFLNEVKDRSDYPAVGAYDPAAGDADAAALATKVLKARK GEAYGYAAMLIAQCQTAAELPATIREILEAIHKTLSAMPEEIAAPVPGDFEDLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67644; Mature: 67644
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEH CCCEEEEECCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCC DFHCGRYLTEDGAPVEIRIEAILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQAD CCCCCCEECCCCCCEEEEEEEEEEECCHHHHHHHCCHHHHCCHHCCCCHHHHHCCCCCCC APGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALDEETEIKLGQGRVPFTRVHKR CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCHHHHHHH LCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGT HHHHHHHHHHHCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GSINLLVFALLTFIAELKDKQSVIFAMEEPEIALPPHTQRRVTRFVLAEMGQSIVTSHSP CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC YVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTERRQFAEAILSRAVLVVEGST CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCC EASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALGKLAFGFYDK CCHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC PNAAFGQDSLEKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFLNEVKDRSDYPAVGAYD CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC PAAGDADAAALATKVLKARKGEAYGYAAMLIAQCQTAAELPATIREILEAIHKTLSAMPE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHH EIAAPVPGDFEDLPG HHCCCCCCCHHCCCC >Mature Secondary Structure MRVRRLKITNFRGVSQGCIDFSGHTLLVGGNNVGKSTVCEALDLVLGPERLFRRPVVDEH CCCEEEEECCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCC DFHCGRYLTEDGAPVEIRIEAILVDLSEEATRRFGGHLRRWDDQAGTFIDERENGLDQAD CCCCCCEECCCCCCEEEEEEEEEEECCHHHHHHHCCHHHHCCHHCCCCHHHHHCCCCCCC APGVVWALPLLFVGRYDRDEDDFVGNTFFDHPTKELDALDEETEIKLGQGRVPFTRVHKR CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCHHHHHHH LCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGSGAVEMWQDTLGRLQALDPAIGEIEQL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH KQIRAEVRSRMGRFVNLAPGDNSTAFFASDLTREHLREVVRLFIAAQPGQHLVPFGRLGT HHHHHHHHHHHCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GSINLLVFALLTFIAELKDKQSVIFAMEEPEIALPPHTQRRVTRFVLAEMGQSIVTSHSP CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC YVIEQFDASQIVILNRDEGGALTGKPIDAQAVKPKTYRTERRQFAEAILSRAVLVVEGST CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCC EASLFPVASSIMEDSLPADSYMHFDLAGVSVFDAGADNAVPRHGPIFSALGKLAFGFYDK CCHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC PNAAFGQDSLEKLKSYTQVWESPEKGIENVLVKQMPIAVVRRFLNEVKDRSDYPAVGAYD CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC PAAGDADAAALATKVLKARKGEAYGYAAMLIAQCQTAAELPATIREILEAIHKTLSAMPE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHH EIAAPVPGDFEDLPG HHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA