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The map label for this gene is nagD [C]

Identifier: 110632784

GI number: 110632784

Start: 466829

End: 467689

Strand: Direct

Name: nagD [C]

Synonym: Meso_0423

Alternate gene names: 110632784

Gene position: 466829-467689 (Clockwise)

Preceding gene: 110632779

Following gene: 110632785

Centisome position: 10.58

GC content: 66.9

Gene sequence:

>861_bases
ATGCCGCAGCCGCCGGCCATGGTCGACAGCCTCGACGCGCTAGCAAAGTCCTATGACCTGATCCTCTGCGATGTCTGGGG
CGTTCTGCACAATGGGGTGGCGGCTTTCCCGCCGGCCGCCGAGGCTCTGGCGCGGGTGAAGCGGGCAGGCAAGACCGTGG
TGCTCGTCACCAATTCGCCGCGGCCGAGCCAGCTTGTGAAGGGCCAGTTGCGCCAGATCGGGGTTCCCGACGAAGCCTGG
GACGAGGTTGTGACCTCTGGCGACGTGACGCGGGAACTTATCCGCAATGGCCCGCGCCGCGTGTTTCACCTCGGCCCGGA
CCGGGACCTGCCGATCTATGACGGGCTCGATGTCGAACTGGTGGAGGAGTTCGAGGCGGCGGGCGTCGTCTGCACCGGGC
TTTTTGACGACGAGACGGAGACGCCGGAAGATTATGCGCAGATGCTGCAGCGCCTGCGCGCCCGCGACCTGCCCTTCATC
TGCGCCAATCCGGATATCGTGGTGGAGCGCGGCGACCGGCTGATTTTCTGCGCCGGCGCGCTCGCACGTGATTACGGCCA
GCTGGGCGGGCGGACGCTGATCGCGGGTAAGCCGCACCGGCCGATCTATGAAGCCGCGCTGGCCGCGGCGGGCCGGATGC
TGGGGCGGGATTTGGAGCCGCGCCAGACGCTCGCAATCGGCGACGGCATGCTGACCGATGTGAAGGGCGCCGCCGGCATG
GACATTGACGTTCTGTACGTGACCGACGGCATCCATGTATCGGAATATAAGGAGGCGGGAAGGCTGGACGAGGCGCGCCT
TGCCGCGTTTTTGGAAAAGCACGGCCACCAGCCGGTGGCGGCGATCGAGCGGCTCAGGTAG

Upstream 100 bases:

>100_bases
CAAGGGCGGTCGGCTGAAAGCGGGTGACACGTGGCGGCTCTTCGGCTAATTCCTCTCGCGTTCCGGGTCGTTGTGCCCCT
TACCCGCCCAAGGAGAAATC

Downstream 100 bases:

>100_bases
GAACAAGCGTGGCTGATTTCCTGCGGCTTTCCGGCTATCAGAATGTCCCCGCGCATCTGCGTGGCGCCGTCGTTGCGATC
GGCAATTTCGACGGCGTGCA

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPQPPAMVDSLDALAKSYDLILCDVWGVLHNGVAAFPPAAEALARVKRAGKTVVLVTNSPRPSQLVKGQLRQIGVPDEAW
DEVVTSGDVTRELIRNGPRRVFHLGPDRDLPIYDGLDVELVEEFEAAGVVCTGLFDDETETPEDYAQMLQRLRARDLPFI
CANPDIVVERGDRLIFCAGALARDYGQLGGRTLIAGKPHRPIYEAALAAAGRMLGRDLEPRQTLAIGDGMLTDVKGAAGM
DIDVLYVTDGIHVSEYKEAGRLDEARLAAFLEKHGHQPVAAIERLR

Sequences:

>Translated_286_residues
MPQPPAMVDSLDALAKSYDLILCDVWGVLHNGVAAFPPAAEALARVKRAGKTVVLVTNSPRPSQLVKGQLRQIGVPDEAW
DEVVTSGDVTRELIRNGPRRVFHLGPDRDLPIYDGLDVELVEEFEAAGVVCTGLFDDETETPEDYAQMLQRLRARDLPFI
CANPDIVVERGDRLIFCAGALARDYGQLGGRTLIAGKPHRPIYEAALAAAGRMLGRDLEPRQTLAIGDGMLTDVKGAAGM
DIDVLYVTDGIHVSEYKEAGRLDEARLAAFLEKHGHQPVAAIERLR
>Mature_285_residues
PQPPAMVDSLDALAKSYDLILCDVWGVLHNGVAAFPPAAEALARVKRAGKTVVLVTNSPRPSQLVKGQLRQIGVPDEAWD
EVVTSGDVTRELIRNGPRRVFHLGPDRDLPIYDGLDVELVEEFEAAGVVCTGLFDDETETPEDYAQMLQRLRARDLPFIC
ANPDIVVERGDRLIFCAGALARDYGQLGGRTLIAGKPHRPIYEAALAAAGRMLGRDLEPRQTLAIGDGMLTDVKGAAGMD
IDVLYVTDGIHVSEYKEAGRLDEARLAAFLEKHGHQPVAAIERLR

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31153; Mature: 31022

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPPAMVDSLDALAKSYDLILCDVWGVLHNGVAAFPPAAEALARVKRAGKTVVLVTNSP
CCCCCHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCC
RPSQLVKGQLRQIGVPDEAWDEVVTSGDVTRELIRNGPRRVFHLGPDRDLPIYDGLDVEL
CHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHH
VEEFEAAGVVCTGLFDDETETPEDYAQMLQRLRARDLPFICANPDIVVERGDRLIFCAGA
HHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEECCCEEEEECHH
LARDYGQLGGRTLIAGKPHRPIYEAALAAAGRMLGRDLEPRQTLAIGDGMLTDVKGAAGM
HHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
DIDVLYVTDGIHVSEYKEAGRLDEARLAAFLEKHGHQPVAAIERLR
CEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
PQPPAMVDSLDALAKSYDLILCDVWGVLHNGVAAFPPAAEALARVKRAGKTVVLVTNSP
CCCCHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCC
RPSQLVKGQLRQIGVPDEAWDEVVTSGDVTRELIRNGPRRVFHLGPDRDLPIYDGLDVEL
CHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHH
VEEFEAAGVVCTGLFDDETETPEDYAQMLQRLRARDLPFICANPDIVVERGDRLIFCAGA
HHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEECCCEEEEECHH
LARDYGQLGGRTLIAGKPHRPIYEAALAAAGRMLGRDLEPRQTLAIGDGMLTDVKGAAGM
HHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
DIDVLYVTDGIHVSEYKEAGRLDEARLAAFLEKHGHQPVAAIERLR
CEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA