Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 110632779

GI number: 110632779

Start: 461633

End: 462886

Strand: Direct

Name: rmuC [H]

Synonym: Meso_0418

Alternate gene names: 110632779

Gene position: 461633-462886 (Clockwise)

Preceding gene: 110632778

Following gene: 110632784

Centisome position: 10.46

GC content: 63.72

Gene sequence:

>1254_bases
ATGAACGATGTGAGTCCGCTTTTTTCCGTTCCTGTGCTCCGGTTGGGAGCGACAGCCTTCTCGCTGGGCGAATTGCTGTT
TGCCGCAGGCTTGTCTCTTTTTTTCCTGATCCTGCTGCTCGTTGTGTCGCTCTGGCGCAGCAGCCGGGTCCGCGCCCTTG
CCGAAGCGGAGGCCGCCGCCCGGGCGCGGGAGGCTGAGGCGCGCCTGGCGGAGCTGGCGAGGACTCAGGCCGAGCTGCAA
GGCCGCATGGGCACCATCGCGGAAGTTTTCGGCAGCCGCCAGGCGGAGCTGACGAAGGCGATTTCAGAACGGCTGGACGG
CATGACCTCGCGCCTTGGCCAATCAATCACGGAACAGACGAAATCCACGCACGAGAATCTGGCCAAGCTTCAGGAGCGCC
TTGCCGTCATTGATACGGCGCAGAACAATATCCAGTCGCTGGCAGGCCAGGTGGTGCAGCTTCAGCAGATCCTCTCCAAC
AAGCAGACGCGTGGCGCCTTCGGGCAATCGCGAATGGAGGCGATCGTCGCCGATGGCTTGCCGCAAGGGGCTTACGAGTT
CCAGGCCACGCTCTCGAACGGCAGCCGGCCGGACTGTCTCGTACGGATGCCGAACGGTGCGCCATCGCTGGTGATCGACG
CGAAATTCCCGCTGGAGGCGTGGAACGCCATCCGGGCCGCTGCGGAAGGGGAAGGCGGGCCTGAGGCGCGGCGCTTCGCA
GAGTCTGCCTTTCGGCGTGATGTGGAGGTGCACGTCAAGGCCATCGCGGAAAAGTATCTTCTGCCCGGCGAAACGCAGGA
CACGGCCTTCATGTTCGTGCCATCGGAATCGATCTTCGCCGAGATCCACGAGAATTTCGAAGCGCTGGTGCAGCGGGCGC
ATCGGGCGCGCGTGGTCATCGTTTCCCCGTCACTTCTGATGCTCTCGATCCAGGTGATCCAGGCGGTGCTGAAGGACGCG
CGCATGCGCGAGCAGGCGCATCTGATCCAGGCGGAAGTGGTGAAGTTGATGCAGGACGTTTCACGCCTTGACGACCGTGT
GCGCAAGCTTCAGGGGCATTTCCTGCAGGCCAACAAGGATGTCGACCTGATCCTCACCTCGACCGACAAGGTGGTCAAGC
GCGGCGCGAAGATCGAGGCGCTGGAGCTGGGTGCGGAACCGGGCAAGGCACTCGACGCGCCGGACGAAGATGACGAGAGG
AGCGCTGCGTTGGGTGGCTCGGGATCGCTGCGGCTGCGGGTGGTGGAGGAGTGA

Upstream 100 bases:

>100_bases
GTTTGCTGGCTGATCGATATCCCGGGACCAAGCCGGATAAAATCACTTTGTTCACGATTTGATCTTATCTTCCTTGAGGG
AATCATCTAGGCTGCCGCCT

Downstream 100 bases:

>100_bases
GGGCTGTTTTGTTATCTCGGCGCTCTTGATCTGCATTCAGGCATGGATCCTCGAGTCAAGCCGAGGATGACAAAGGCATG
GGGCGCATCCGCCAATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNDVSPLFSVPVLRLGATAFSLGELLFAAGLSLFFLILLLVVSLWRSSRVRALAEAEAAARAREAEARLAELARTQAELQ
GRMGTIAEVFGSRQAELTKAISERLDGMTSRLGQSITEQTKSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQLQQILSN
KQTRGAFGQSRMEAIVADGLPQGAYEFQATLSNGSRPDCLVRMPNGAPSLVIDAKFPLEAWNAIRAAAEGEGGPEARRFA
ESAFRRDVEVHVKAIAEKYLLPGETQDTAFMFVPSESIFAEIHENFEALVQRAHRARVVIVSPSLLMLSIQVIQAVLKDA
RMREQAHLIQAEVVKLMQDVSRLDDRVRKLQGHFLQANKDVDLILTSTDKVVKRGAKIEALELGAEPGKALDAPDEDDER
SAALGGSGSLRLRVVEE

Sequences:

>Translated_417_residues
MNDVSPLFSVPVLRLGATAFSLGELLFAAGLSLFFLILLLVVSLWRSSRVRALAEAEAAARAREAEARLAELARTQAELQ
GRMGTIAEVFGSRQAELTKAISERLDGMTSRLGQSITEQTKSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQLQQILSN
KQTRGAFGQSRMEAIVADGLPQGAYEFQATLSNGSRPDCLVRMPNGAPSLVIDAKFPLEAWNAIRAAAEGEGGPEARRFA
ESAFRRDVEVHVKAIAEKYLLPGETQDTAFMFVPSESIFAEIHENFEALVQRAHRARVVIVSPSLLMLSIQVIQAVLKDA
RMREQAHLIQAEVVKLMQDVSRLDDRVRKLQGHFLQANKDVDLILTSTDKVVKRGAKIEALELGAEPGKALDAPDEDDER
SAALGGSGSLRLRVVEE
>Mature_417_residues
MNDVSPLFSVPVLRLGATAFSLGELLFAAGLSLFFLILLLVVSLWRSSRVRALAEAEAAARAREAEARLAELARTQAELQ
GRMGTIAEVFGSRQAELTKAISERLDGMTSRLGQSITEQTKSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQLQQILSN
KQTRGAFGQSRMEAIVADGLPQGAYEFQATLSNGSRPDCLVRMPNGAPSLVIDAKFPLEAWNAIRAAAEGEGGPEARRFA
ESAFRRDVEVHVKAIAEKYLLPGETQDTAFMFVPSESIFAEIHENFEALVQRAHRARVVIVSPSLLMLSIQVIQAVLKDA
RMREQAHLIQAEVVKLMQDVSRLDDRVRKLQGHFLQANKDVDLILTSTDKVVKRGAKIEALELGAEPGKALDAPDEDDER
SAALGGSGSLRLRVVEE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=288, Percent_Identity=27.4305555555556, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 45524; Mature: 45524

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVSPLFSVPVLRLGATAFSLGELLFAAGLSLFFLILLLVVSLWRSSRVRALAEAEAAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAREAEARLAELARTQAELQGRMGTIAEVFGSRQAELTKAISERLDGMTSRLGQSITEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQLQQILSNKQTRGAFGQSRMEAIVADGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCC
PQGAYEFQATLSNGSRPDCLVRMPNGAPSLVIDAKFPLEAWNAIRAAAEGEGGPEARRFA
CCCHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHH
ESAFRRDVEVHVKAIAEKYLLPGETQDTAFMFVPSESIFAEIHENFEALVQRAHRARVVI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEE
VSPSLLMLSIQVIQAVLKDARMREQAHLIQAEVVKLMQDVSRLDDRVRKLQGHFLQANKD
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDLILTSTDKVVKRGAKIEALELGAEPGKALDAPDEDDERSAALGGSGSLRLRVVEE
CEEEEECCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MNDVSPLFSVPVLRLGATAFSLGELLFAAGLSLFFLILLLVVSLWRSSRVRALAEAEAAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAREAEARLAELARTQAELQGRMGTIAEVFGSRQAELTKAISERLDGMTSRLGQSITEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQLQQILSNKQTRGAFGQSRMEAIVADGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCC
PQGAYEFQATLSNGSRPDCLVRMPNGAPSLVIDAKFPLEAWNAIRAAAEGEGGPEARRFA
CCCHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHH
ESAFRRDVEVHVKAIAEKYLLPGETQDTAFMFVPSESIFAEIHENFEALVQRAHRARVVI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEE
VSPSLLMLSIQVIQAVLKDARMREQAHLIQAEVVKLMQDVSRLDDRVRKLQGHFLQANKD
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDLILTSTDKVVKRGAKIEALELGAEPGKALDAPDEDDERSAALGGSGSLRLRVVEE
CEEEEECCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]