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The map label for this gene is oxaA [H]

Identifier: 110632737

GI number: 110632737

Start: 418279

End: 420108

Strand: Direct

Name: oxaA [H]

Synonym: Meso_0376

Alternate gene names: 110632737

Gene position: 418279-420108 (Clockwise)

Preceding gene: 110632736

Following gene: 110632738

Centisome position: 9.48

GC content: 60.55

Gene sequence:

>1830_bases
ATGGAAAACAATCGCAATCTCCTCATCACAATCGCGCTGTCGGTGGTTATCCTGACGCTTTGGCAGGTGTTCTACGTCAA
CCCGCGCGTCGATGCCCAGCGCGAGGCCGCCCAGATCGAGGCGCAGCGCGCGCAGGAGACTGAGGAGAAACTGGGCACGC
AGGGCGCGGATATTCCTGCCCCCGGTGCCACCCCAGGCAGCACGGCGGTCCCCGGTTCCGCAATTCCGCGAACGCAGGTC
ACCCGCCAGGAGGCACTTGCCGGTGCTGAGCGTGTGACGATCGATACTCCCCGTCTTGCAGGCACCATCAACCTGGCGGG
CGCACGTTTGGACGACCTGCTGCTCAAGGATTACAGGGTCACCGTTGACAAGGACTCGCCCAATATCGATTTGCTGGGCC
CCGCAGGCCTTCCCGAGGGATATTTTGTCGAGGTGGGTTATACCGGCAATGCGTCGACCGGTGCGGTTCCCGGTCCTGAT
ACCGTCTGGCAGCTGCAGGAGGGCTCGACGCTCTCGCCCGGAAGCCCGGTCACACTGAGCTTCACGAACGACCGCGGCCT
CACCTTCCTGCGCACCTTCGCGGTGGACGAAAATTATCTCTTCACGATTACCGATACGATCCGGAACGCGGCCGGCGAGC
CGGTCGAGATCCGCAATTACGGCCGCACCACGCGCTTCGGCCAGCCGAAGACGGCCGGCATTTACATCCTGCATGAAGGC
TTCATCGGCGTTCTTGGCGAGGAAGGTCTTCGCGAAGTGGATTATTCGACGGCCCAGGAGGATGGGCAGGTTCTGCCCGG
CAAGTCCGCCGATGGCTGGCTGGGCATCACCGACAAGTACTGGGCCGTGACCATGGTCCCGCGCGCGCAAAAGGATTTCG
AGCCGCGCTTTGCCTATTTCTCGGACGGCCGGGAGCGCTACCAGGCGGATTACCTGACCGATCCGGTCACGGTCGCGCCG
GGCGGCGAGGCCAAGATCGAGACGCTCGTCTTCGCCGGGGCAAAGGAGGTGCATGTCGTCGATGCCTATGAGACGCAGCA
CAACATCCGCCAATTCGAGCTTCTGATCGACTGGGGCTGGTTCTACTTCATCACCAAGCCCATGTTCTACCTGATCGACT
GGCTCTTCAGGCTGCTCGGCAATTTCGGTGTCGCCATCCTGGCCACCACCGTCTTCGTCAAGCTCGTCTTCTTCCCGCTC
GCCAACAAGTCCTACAAATCCATGGCGAACATGAAGAAGGTTCAGCCGGCGCTGCTCGAGATCCGCGAGAAATATGCGGA
CGACAAGATGAAGCAGCAGCAGGCGATGATGGAGCTCTACAAGAAGGAGAAGATCAACCCGCTCGCGGGCTGCTGGCCGA
TCCTTATCCAGATCCCGGTCTTTTTCGCGCTCTACAAGGTGCTTTACGTGACGATCGAGATGCGTCACGCGCCCTTCTTC
GGCTGGATTCAGGACCTGTCGGCGCCGGACCCGACGACGATCTTCAACCTCTTTGGATTGCTGCCTTTCGATCCGTCGCA
GGTTCCTGTCTTTGGACCGTTCCTGATGCTGGGCGTCTGGCCGATCATCATGGGCATCACCATGTTCCTGCAAATGCGCA
TGAACCCGACGCCGCCGGATCCAACGCAGGCCATGATCTTCAACTGGATGCCGGTAATCTTCACCTTCATGCTGGCGACC
TTCCCAGCCGGCCTGGTGATCTACTGGGCATGGAACAACCTGCTCTCCATCATCCAGCAGGGCGTGATCATGAAGCGCCA
GGGCGCCAAGATCGAGCTGTGGGACAATATGGTGAACCTGTTCCGGCGAAAGCCGAAACCGGCGGAATAA

Upstream 100 bases:

>100_bases
GAAGGCGCGAAATCTTGGACGCGCCGTTCGGAGCGCTGAAGGACGAGCTTTCCCGGCGCATCCGCGGGAACAAACCCGCT
CGCACGGGCTAAGGAAACTG

Downstream 100 bases:

>100_bases
AAGATCGGCGAGGCCCGCTTCATTCGGCGGGCCTTCCTTTTCGCACAGGCTTGCCTTTGCGGATTTCCCCTTGTCCGCCC
GTGTTGTATAAAAGGGCGCA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPAPGATPGSTAVPGSAIPRTQV
TRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRVTVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPD
TVWQLQEGSTLSPGSPVTLSFTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG
FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYFSDGRERYQADYLTDPVTVAP
GGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGWFYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPL
ANKSYKSMANMKKVQPALLEIREKYADDKMKQQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPFF
GWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPPDPTQAMIFNWMPVIFTFMLAT
FPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVNLFRRKPKPAE

Sequences:

>Translated_609_residues
MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPAPGATPGSTAVPGSAIPRTQV
TRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRVTVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPD
TVWQLQEGSTLSPGSPVTLSFTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG
FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYFSDGRERYQADYLTDPVTVAP
GGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGWFYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPL
ANKSYKSMANMKKVQPALLEIREKYADDKMKQQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPFF
GWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPPDPTQAMIFNWMPVIFTFMLAT
FPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVNLFRRKPKPAE
>Mature_609_residues
MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPAPGATPGSTAVPGSAIPRTQV
TRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRVTVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPD
TVWQLQEGSTLSPGSPVTLSFTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG
FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYFSDGRERYQADYLTDPVTVAP
GGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGWFYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPL
ANKSYKSMANMKKVQPALLEIREKYADDKMKQQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPFF
GWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPPDPTQAMIFNWMPVIFTFMLAT
FPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVNLFRRKPKPAE

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=514, Percent_Identity=32.1011673151751, Blast_Score=240, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 68304; Mature: 68304

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPA
CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGATPGSTAVPGSAIPRTQVTRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRV
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHHHHHCEEE
TVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPDTVWQLQEGSTLSPGSPVTLS
EEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEE
FTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG
EECCCCCEEEEEEEECCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEECC
FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYF
CHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCEEHH
SDGRERYQADYLTDPVTVAPGGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGW
CCCHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCEEEEEECHHHHCCCEEEEEEEECHH
FYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALLE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IREKYADDKMKQQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPFF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHH
GWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPPD
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVNL
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCEEECCCCEEEEHHHHHHH
FRRKPKPAE
HHCCCCCCC
>Mature Secondary Structure
MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPA
CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGATPGSTAVPGSAIPRTQVTRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRV
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHHHHHCEEE
TVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPDTVWQLQEGSTLSPGSPVTLS
EEECCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEE
FTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG
EECCCCCEEEEEEEECCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEECC
FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYF
CHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCEEHH
SDGRERYQADYLTDPVTVAPGGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGW
CCCHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCEEEEEECHHHHCCCEEEEEEEECHH
FYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALLE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IREKYADDKMKQQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPFF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHH
GWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPPD
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVNL
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCEEECCCCEEEEHHHHHHH
FRRKPKPAE
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]