Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632732
Identifier: 110632732
GI number: 110632732
Start: 414633
End: 415274
Strand: Direct
Name: 110632732
Synonym: Meso_0371
Alternate gene names: NA
Gene position: 414633-415274 (Clockwise)
Preceding gene: 110632731
Following gene: 110632733
Centisome position: 9.4
GC content: 65.26
Gene sequence:
>642_bases ATGCCCCTGCAAAACCGTGTAACGCCTTTGGGAACAGTCGAAGCTGTAGCCGCGCGGGGGCTGTTCACCGGCAATCGCGG CGTCATCCACGATCCAGAAACCAGAACCCTTCTGAGGCGGCGCTGGTCCACGAGAGCATGGATCATCTGCGAGTGCGATT TCCGGGGGCGCCGCCGCGATGTAATGGGCCGTAACAGCCGGTACGGCACAGCCGGCTGGACAGAACTCTTCTTCCTTGAC GAGGTGACGGCGCTCGCGGCGGGTCACCGCCCCTGCTTCTACTGCCGGCGCAAGCGCGCGGAGGCGTTTGCGCGGGCATT TGCCGAAGGGCAGAGGAAAGAGCGGATTTCCGCATGTGAGATGGACACGCTCCTCCACGGGAAGCGCCGGGCATCCGGTG GAAGGCCCATCCCGGTTTCCGAGGGCGGCGCGCCGCTTCCCGACGGAGCCATGTTCGAAGCCCACGGGCAGGCCTTTGCT TTACGCGGCGGCAAGCTTCTGCCTTGGGGCTTCAATGGCTATGCCGAACCTCGTGCGCCACGGGATGCCGGCCCGGAATA CACCTTGATCACGCCGCTTGCGACAGTGGCGGCTTTGCGGGCGGGCTATCGCCCGGTCTGGCATTCCTCTGCCGGCTCTT GA
Upstream 100 bases:
>100_bases GTGGGTGTTGCTCTTTTGCAGCGGTCATGTTCGGCCGGCGAGGATGGGATTGATCACCACCCGCGATGCGTTCCAATGTA GCCTCAGGCCGAGGACGAAA
Downstream 100 bases:
>100_bases CCAGGCAAAGGCTTCAGAGGCATCAAGCGCCCATGCGGGCGAATTACAAAATGCAGCGGCTCTACTTGCCGGAGGACCTT TCAAAAGGGGCGGAGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPLQNRVTPLGTVEAVAARGLFTGNRGVIHDPETRTLLRRRWSTRAWIICECDFRGRRRDVMGRNSRYGTAGWTELFFLD EVTALAAGHRPCFYCRRKRAEAFARAFAEGQRKERISACEMDTLLHGKRRASGGRPIPVSEGGAPLPDGAMFEAHGQAFA LRGGKLLPWGFNGYAEPRAPRDAGPEYTLITPLATVAALRAGYRPVWHSSAGS
Sequences:
>Translated_213_residues MPLQNRVTPLGTVEAVAARGLFTGNRGVIHDPETRTLLRRRWSTRAWIICECDFRGRRRDVMGRNSRYGTAGWTELFFLD EVTALAAGHRPCFYCRRKRAEAFARAFAEGQRKERISACEMDTLLHGKRRASGGRPIPVSEGGAPLPDGAMFEAHGQAFA LRGGKLLPWGFNGYAEPRAPRDAGPEYTLITPLATVAALRAGYRPVWHSSAGS >Mature_212_residues PLQNRVTPLGTVEAVAARGLFTGNRGVIHDPETRTLLRRRWSTRAWIICECDFRGRRRDVMGRNSRYGTAGWTELFFLDE VTALAAGHRPCFYCRRKRAEAFARAFAEGQRKERISACEMDTLLHGKRRASGGRPIPVSEGGAPLPDGAMFEAHGQAFAL RGGKLLPWGFNGYAEPRAPRDAGPEYTLITPLATVAALRAGYRPVWHSSAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23555; Mature: 23424
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQNRVTPLGTVEAVAARGLFTGNRGVIHDPETRTLLRRRWSTRAWIICECDFRGRRRD CCCCCCCCCCHHHHHHHHHCEEECCCCCEECCHHHHHHHHHCCCCEEEEEECCCCCCCHH VMGRNSRYGTAGWTELFFLDEVTALAAGHRPCFYCRRKRAEAFARAFAEGQRKERISACE HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDTLLHGKRRASGGRPIPVSEGGAPLPDGAMFEAHGQAFALRGGKLLPWGFNGYAEPRAP HHHHHHCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCEECCCCCCCCCCCCCC RDAGPEYTLITPLATVAALRAGYRPVWHSSAGS CCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PLQNRVTPLGTVEAVAARGLFTGNRGVIHDPETRTLLRRRWSTRAWIICECDFRGRRRD CCCCCCCCCHHHHHHHHHCEEECCCCCEECCHHHHHHHHHCCCCEEEEEECCCCCCCHH VMGRNSRYGTAGWTELFFLDEVTALAAGHRPCFYCRRKRAEAFARAFAEGQRKERISACE HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDTLLHGKRRASGGRPIPVSEGGAPLPDGAMFEAHGQAFALRGGKLLPWGFNGYAEPRAP HHHHHHCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCEECCCCCCCCCCCCCC RDAGPEYTLITPLATVAALRAGYRPVWHSSAGS CCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA