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The map label for this gene is ytnM [H]

Identifier: 110632717

GI number: 110632717

Start: 398631

End: 399407

Strand: Reverse

Name: ytnM [H]

Synonym: Meso_0356

Alternate gene names: 110632717

Gene position: 399407-398631 (Counterclockwise)

Preceding gene: 110632718

Following gene: 110632716

Centisome position: 9.05

GC content: 60.23

Gene sequence:

>777_bases
TTGCAAGACTTTATTTTATTTGCGGCAGTCGGTTTCGCAGCCCAGATCGTGGACGGCGCGTTGGGGATGGCCTACGGCGT
AATCTGCTCGACAGTGCTCCTGAGCTTCGGCGTTCCACCTGCCTATGCATCCGCTTCAGTCCATGCGGCTGAGCTATTTA
CCACCGCAGCTTCCGGCTCGGCTCATCTTTACCATCGCAACATCGACTGGCGGCTCTTCGTCCGGCTTGCGCCGTTCGGA
ATTCTTGGCGGGTGCATAGGCGCTTATGTGCTCACCTCCTTTGAAGGCAATGCGGTGAAGCCCTTTATAACCACCTATCT
TGCGCTGGTCGGCGGCTGGCTCATCTTCAGGTCGTTCCGCAAGATTCCGTCCAACCCTGTACCGGCGAAGGTGGTCGCTC
CCCTTGGAGCTGTGGGCGGCTTTCTGGATGCGGCCGGAGGCGGCGGATGGGGACCTATCGTCACCACCGGCCTTCTCGGA
GCCGGGGCTCCACCCCGCTACGTCATCGGGACGGTGAATGCGACCGAGTTTCTGGTCGCGACGGCGGTCTCTCTCAGTTT
TCTTTTTTCCCTTTTGACCGGGCACTGGGAGGCGGCAGGTACGTATGTGGAGCACGCAGCCGCCATTGGTGGGCTGATCG
TCGGCGGAATGGTAGCAGCTCCCTTCGCCGGATGGATCTTGAAGTCGATCAAGGAGCGCATCCTCCTGCGTACGATCGGC
TGCCTGATCGTGCTCCTGGCGACATGGCAGACTGCGCAGCTTCTGAAGCTGGTGTGA

Upstream 100 bases:

>100_bases
AAAAAGGATTTCGCGGTTGAGTTGTCCGGGGGAAAATCAGAGCCTTACGTGAGGTGCCTGCTCCGTCTAGTTTTGCGGCG
CATTACCAGAGGGGTCGCCT

Downstream 100 bases:

>100_bases
GGGCGGCGGCAATCTTTCGATTTTAATCGATCCAACAGGCTGGAGAAGTCGCCGCGGGGTTTGCAAAAGAAGTGCCTTTG
GCGCATATGGCCCCAGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MQDFILFAAVGFAAQIVDGALGMAYGVICSTVLLSFGVPPAYASASVHAAELFTTAASGSAHLYHRNIDWRLFVRLAPFG
ILGGCIGAYVLTSFEGNAVKPFITTYLALVGGWLIFRSFRKIPSNPVPAKVVAPLGAVGGFLDAAGGGGWGPIVTTGLLG
AGAPPRYVIGTVNATEFLVATAVSLSFLFSLLTGHWEAAGTYVEHAAAIGGLIVGGMVAAPFAGWILKSIKERILLRTIG
CLIVLLATWQTAQLLKLV

Sequences:

>Translated_258_residues
MQDFILFAAVGFAAQIVDGALGMAYGVICSTVLLSFGVPPAYASASVHAAELFTTAASGSAHLYHRNIDWRLFVRLAPFG
ILGGCIGAYVLTSFEGNAVKPFITTYLALVGGWLIFRSFRKIPSNPVPAKVVAPLGAVGGFLDAAGGGGWGPIVTTGLLG
AGAPPRYVIGTVNATEFLVATAVSLSFLFSLLTGHWEAAGTYVEHAAAIGGLIVGGMVAAPFAGWILKSIKERILLRTIG
CLIVLLATWQTAQLLKLV
>Mature_258_residues
MQDFILFAAVGFAAQIVDGALGMAYGVICSTVLLSFGVPPAYASASVHAAELFTTAASGSAHLYHRNIDWRLFVRLAPFG
ILGGCIGAYVLTSFEGNAVKPFITTYLALVGGWLIFRSFRKIPSNPVPAKVVAPLGAVGGFLDAAGGGGWGPIVTTGLLG
AGAPPRYVIGTVNATEFLVATAVSLSFLFSLLTGHWEAAGTYVEHAAAIGGLIVGGMVAAPFAGWILKSIKERILLRTIG
CLIVLLATWQTAQLLKLV

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26780; Mature: 26780

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFILFAAVGFAAQIVDGALGMAYGVICSTVLLSFGVPPAYASASVHAAELFTTAASGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCC
AHLYHRNIDWRLFVRLAPFGILGGCIGAYVLTSFEGNAVKPFITTYLALVGGWLIFRSFR
CEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KIPSNPVPAKVVAPLGAVGGFLDAAGGGGWGPIVTTGLLGAGAPPRYVIGTVNATEFLVA
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
TAVSLSFLFSLLTGHWEAAGTYVEHAAAIGGLIVGGMVAAPFAGWILKSIKERILLRTIG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLIVLLATWQTAQLLKLV
HHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MQDFILFAAVGFAAQIVDGALGMAYGVICSTVLLSFGVPPAYASASVHAAELFTTAASGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCC
AHLYHRNIDWRLFVRLAPFGILGGCIGAYVLTSFEGNAVKPFITTYLALVGGWLIFRSFR
CEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KIPSNPVPAKVVAPLGAVGGFLDAAGGGGWGPIVTTGLLGAGAPPRYVIGTVNATEFLVA
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
TAVSLSFLFSLLTGHWEAAGTYVEHAAAIGGLIVGGMVAAPFAGWILKSIKERILLRTIG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLIVLLATWQTAQLLKLV
HHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]