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The map label for this gene is fliR [H]

Identifier: 110632632

GI number: 110632632

Start: 310053

End: 310799

Strand: Reverse

Name: fliR [H]

Synonym: Meso_0271

Alternate gene names: 110632632

Gene position: 310799-310053 (Counterclockwise)

Preceding gene: 110632633

Following gene: 110632631

Centisome position: 7.04

GC content: 58.77

Gene sequence:

>747_bases
ATGCCCGAGACCGCGATTCTCGCAGCCTTCCTCGCCTTTTGCCGTGTGGGGGCATGCTTCATGCTGATGCCGGGCCTGGG
GAGCGCGCGCGTTCCCATGCAGGTAAGATTGTTCGTGGCCGTCGGTGCATCACTCGCGCTTCTCGCGCATCTATGGGACG
TGATTGCGCCTCATGCGTCGGATCGCCCGGACATCCTCCTCCTGCTCATCGGATCGGAAATTCTGATCGGATCGTTGATT
GGGCTCGTGGCACGGCTTTACGTTCTGGCCCTGCAATTCATCGGCTCGGCAATCGCGTTGATGACGGGCTTCGGGATGGC
AGCGGGCGGAGTGGCGATCGAGGAAAACGAACCGCAGCCTGCCGTCGCCGCGCTCATCTCCTTCTCCGCGCTCATGTTGC
TGTTCGTGCTCAACTTTCACCACGCCATCATAGAAGCGTTGGTTGCCTCCTACCGGCTGGCGCCGATCGAAGCGCTGTTC
GACCCGCGAGCCGCGCTCACGGACATTGCCGATACGCTTTCGGAAGCATTCTTTGTGATGATCCGGCTGGGCAGCCCGTT
TGTGGCCTATGCGATCCTGATAAATCTCGCTTTCGGCTTCATCAACAAGCTGACACCGCAGATTCCCATCTATTTCATAT
CGCTGCCCTTCGTCATTGCGGGCGGGCTACTGCTTCTTTATTTCGGCATCGGCACTTTTCTTTCCTTGTTTGCCGATGGG
TTCTTTCCCACAACGCTCGGCAGGTGA

Upstream 100 bases:

>100_bases
TCTCTCTGGCCTGCCGGCCATCATCCGCCGCAAGAGCGGGGATTGCGGAAGCTCCTGCTCCCCTTCCGTCGCCGCGACCT
GCTGGACGGAGCGATAACGC

Downstream 100 bases:

>100_bases
GGATGGCAACGCCCCAAAAGCTGGCAAGGCTTCTGCTTCTGCAACAGCGCCTGAAAAAGCTTCATGAAGCCAAGCAGGCG
GCATTCCTGAGGGAAGCGTC

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPETAILAAFLAFCRVGACFMLMPGLGSARVPMQVRLFVAVGASLALLAHLWDVIAPHASDRPDILLLLIGSEILIGSLI
GLVARLYVLALQFIGSAIALMTGFGMAAGGVAIEENEPQPAVAALISFSALMLLFVLNFHHAIIEALVASYRLAPIEALF
DPRAALTDIADTLSEAFFVMIRLGSPFVAYAILINLAFGFINKLTPQIPIYFISLPFVIAGGLLLLYFGIGTFLSLFADG
FFPTTLGR

Sequences:

>Translated_248_residues
MPETAILAAFLAFCRVGACFMLMPGLGSARVPMQVRLFVAVGASLALLAHLWDVIAPHASDRPDILLLLIGSEILIGSLI
GLVARLYVLALQFIGSAIALMTGFGMAAGGVAIEENEPQPAVAALISFSALMLLFVLNFHHAIIEALVASYRLAPIEALF
DPRAALTDIADTLSEAFFVMIRLGSPFVAYAILINLAFGFINKLTPQIPIYFISLPFVIAGGLLLLYFGIGTFLSLFADG
FFPTTLGR
>Mature_247_residues
PETAILAAFLAFCRVGACFMLMPGLGSARVPMQVRLFVAVGASLALLAHLWDVIAPHASDRPDILLLLIGSEILIGSLIG
LVARLYVLALQFIGSAIALMTGFGMAAGGVAIEENEPQPAVAALISFSALMLLFVLNFHHAIIEALVASYRLAPIEALFD
PRAALTDIADTLSEAFFVMIRLGSPFVAYAILINLAFGFINKLTPQIPIYFISLPFVIAGGLLLLYFGIGTFLSLFADGF
FPTTLGR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26431; Mature: 26300

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETAILAAFLAFCRVGACFMLMPGLGSARVPMQVRLFVAVGASLALLAHLWDVIAPHAS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DRPDILLLLIGSEILIGSLIGLVARLYVLALQFIGSAIALMTGFGMAAGGVAIEENEPQP
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCH
AVAALISFSALMLLFVLNFHHAIIEALVASYRLAPIEALFDPRAALTDIADTLSEAFFVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
IRLGSPFVAYAILINLAFGFINKLTPQIPIYFISLPFVIAGGLLLLYFGIGTFLSLFADG
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FFPTTLGR
CCCCCCCC
>Mature Secondary Structure 
PETAILAAFLAFCRVGACFMLMPGLGSARVPMQVRLFVAVGASLALLAHLWDVIAPHAS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DRPDILLLLIGSEILIGSLIGLVARLYVLALQFIGSAIALMTGFGMAAGGVAIEENEPQP
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCH
AVAALISFSALMLLFVLNFHHAIIEALVASYRLAPIEALFDPRAALTDIADTLSEAFFVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
IRLGSPFVAYAILINLAFGFINKLTPQIPIYFISLPFVIAGGLLLLYFGIGTFLSLFADG
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FFPTTLGR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]