| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632593
Identifier: 110632593
GI number: 110632593
Start: 262579
End: 263163
Strand: Reverse
Name: 110632593
Synonym: Meso_0232
Alternate gene names: NA
Gene position: 263163-262579 (Counterclockwise)
Preceding gene: 110632603
Following gene: 110632573
Centisome position: 5.96
GC content: 55.56
Gene sequence:
>585_bases GTGGCTAATTCCCGTCTATGTTCGATTCCGAATTGCGGCAAGCCTCATTTGGCTCGCGGGTGGTGTAGCGCCCATTGGAA CCGCTGGCGCAACCACGGTGATCCGCTGGGAGGGGGGACGCCCAAAGGCGCAGCCCTTCTCTTTGCGCAGGAAGCAGCGA GCTACCAAAAGGCGGCGTGCCTCTTTTGGCCGTATGCAAAGAATTCTGACGGCTATGGAAACCTTTGGGTAAGCGGAGCG CCCACCTTGGCTCATCGCTACGTATGCAAATTAGCGCATGGAAGCGCACCATCCGAACTTCATGAAGCAGCGCATTCCTG CGGGAATGGCCACCTAGGATGCGTTAACCCGGCACATATCTCGTGGAAGACACGGACTGAAAACGAGAAAGACAAGGACG CACATGGGACAAAAAGCAAAGGGGAAGCCCACCGAAGCGCTAAGCTGACTGAAGATCAGGTCCGCCAGATCAGGTCACTT CGAGGGGTCTTGTCACAAAGCCAGCTGGCCCAGATTTATGGTGTGAGCATCCCCAATATTTCCGGCATACAGCAAAGGAA AATTTGGGGGTGGCTGCCTGATTAG
Upstream 100 bases:
>100_bases TTGTCAATGTTTGCACTCCTATGGTACAAACAGCGAACCCGCCGAGCGTTGGCGCGCTGCGACGGGTTCTAACCAAGCCA ACCTTTCGAGGAGGTCAGCA
Downstream 100 bases:
>100_bases ACAGCCGATCCTTCCAGTTCACGAAGGGACTGCACGAGTGTCGTGCGGGAGGGATTGCCACGGGGCCGCGAGCCGGTAAT CTCGGCAATCTTGGTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MANSRLCSIPNCGKPHLARGWCSAHWNRWRNHGDPLGGGTPKGAALLFAQEAASYQKAACLFWPYAKNSDGYGNLWVSGA PTLAHRYVCKLAHGSAPSELHEAAHSCGNGHLGCVNPAHISWKTRTENEKDKDAHGTKSKGEAHRSAKLTEDQVRQIRSL RGVLSQSQLAQIYGVSIPNISGIQQRKIWGWLPD
Sequences:
>Translated_194_residues MANSRLCSIPNCGKPHLARGWCSAHWNRWRNHGDPLGGGTPKGAALLFAQEAASYQKAACLFWPYAKNSDGYGNLWVSGA PTLAHRYVCKLAHGSAPSELHEAAHSCGNGHLGCVNPAHISWKTRTENEKDKDAHGTKSKGEAHRSAKLTEDQVRQIRSL RGVLSQSQLAQIYGVSIPNISGIQQRKIWGWLPD >Mature_193_residues ANSRLCSIPNCGKPHLARGWCSAHWNRWRNHGDPLGGGTPKGAALLFAQEAASYQKAACLFWPYAKNSDGYGNLWVSGAP TLAHRYVCKLAHGSAPSELHEAAHSCGNGHLGCVNPAHISWKTRTENEKDKDAHGTKSKGEAHRSAKLTEDQVRQIRSLR GVLSQSQLAQIYGVSIPNISGIQQRKIWGWLPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21198; Mature: 21067
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSRLCSIPNCGKPHLARGWCSAHWNRWRNHGDPLGGGTPKGAALLFAQEAASYQKAAC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHCEE LFWPYAKNSDGYGNLWVSGAPTLAHRYVCKLAHGSAPSELHEAAHSCGNGHLGCVNPAHI EEECCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEE SWKTRTENEKDKDAHGTKSKGEAHRSAKLTEDQVRQIRSLRGVLSQSQLAQIYGVSIPNI EEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SGIQQRKIWGWLPD CCCCHHHCCCCCCC >Mature Secondary Structure ANSRLCSIPNCGKPHLARGWCSAHWNRWRNHGDPLGGGTPKGAALLFAQEAASYQKAAC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHCEE LFWPYAKNSDGYGNLWVSGAPTLAHRYVCKLAHGSAPSELHEAAHSCGNGHLGCVNPAHI EEECCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEE SWKTRTENEKDKDAHGTKSKGEAHRSAKLTEDQVRQIRSLRGVLSQSQLAQIYGVSIPNI EEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SGIQQRKIWGWLPD CCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA