| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632573
Identifier: 110632573
GI number: 110632573
Start: 246482
End: 246988
Strand: Reverse
Name: 110632573
Synonym: Meso_0211
Alternate gene names: NA
Gene position: 246988-246482 (Counterclockwise)
Preceding gene: 110632593
Following gene: 110632572
Centisome position: 5.6
GC content: 54.64
Gene sequence:
>507_bases ATGCCCACTCTGCTCACAGAGGCGCGCGTGGTTAACGGAAGCGTTATCTACCTGTCCCTGGCCGAGACTGTCATTGATGG TGGCAATGTTCCAGAGGTTCGCATTTGCACCAGATTGAGATTGGACCTCGCCTTCGCTCAAGCACTGAGGGACAACCTGT CGGCGCGCATTGCGCCAATTCATGCGCTTGGTCATGCGGCCTCCACATGCGCCCGCTCCAACTCACGTTCCATCCATTCC ATGAGCCGGTCGTACGTCTTCACGGTGAACCCGGCCCCGTTCTCGCGAACGCGCTTGAAAAATGTGTTGTCTTTGATTGC GCGCTGGCTAATCGTTTGCTCCGACATGCCCGTAAGGCTGGACAGACGTTCGGCGGTCTCGAAAAGTCGGGATCGAAGTT CCTGTTCCATAGTTGCCAGTATGCGTATTTCTACGCCTCATGCAAGCGAATTTTTACGCGTTGCCTGCATTTCTTGCGAA TATAGATTCCGCGCATGCCAAAACTGA
Upstream 100 bases:
>100_bases ATTTCTGATGAGCGATGAGGTTGTGGTTCGGAGTGGGAAGACGCTTCGCATAGGCGATATAGATTGGGTCATCGAGGAAC CTGTTCACGTCGACGCCAAA
Downstream 100 bases:
>100_bases CGCCGGAAAAACTGGCCGAGGCCATTCGAGATGCGGGTTTCACAGCCGCCCGGCTGTCGCGGGAAATCGGTCGCGACAAG GACTATGTGCGCGACTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPTLLTEARVVNGSVIYLSLAETVIDGGNVPEVRICTRLRLDLAFAQALRDNLSARIAPIHALGHAASTCARSNSRSIHS MSRSYVFTVNPAPFSRTRLKNVLSLIARWLIVCSDMPVRLDRRSAVSKSRDRSSCSIVASMRISTPHASEFLRVACISCE YRFRACQN
Sequences:
>Translated_168_residues MPTLLTEARVVNGSVIYLSLAETVIDGGNVPEVRICTRLRLDLAFAQALRDNLSARIAPIHALGHAASTCARSNSRSIHS MSRSYVFTVNPAPFSRTRLKNVLSLIARWLIVCSDMPVRLDRRSAVSKSRDRSSCSIVASMRISTPHASEFLRVACISCE YRFRACQN >Mature_167_residues PTLLTEARVVNGSVIYLSLAETVIDGGNVPEVRICTRLRLDLAFAQALRDNLSARIAPIHALGHAASTCARSNSRSIHSM SRSYVFTVNPAPFSRTRLKNVLSLIARWLIVCSDMPVRLDRRSAVSKSRDRSSCSIVASMRISTPHASEFLRVACISCEY RFRACQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18595; Mature: 18464
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLLTEARVVNGSVIYLSLAETVIDGGNVPEVRICTRLRLDLAFAQALRDNLSARIAPI CCCCCCHHEEECCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHH HALGHAASTCARSNSRSIHSMSRSYVFTVNPAPFSRTRLKNVLSLIARWLIVCSDMPVRL HHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE DRRSAVSKSRDRSSCSIVASMRISTPHASEFLRVACISCEYRFRACQN CHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTLLTEARVVNGSVIYLSLAETVIDGGNVPEVRICTRLRLDLAFAQALRDNLSARIAPI CCCCCHHEEECCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHH HALGHAASTCARSNSRSIHSMSRSYVFTVNPAPFSRTRLKNVLSLIARWLIVCSDMPVRL HHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE DRRSAVSKSRDRSSCSIVASMRISTPHASEFLRVACISCEYRFRACQN CHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA