Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632590
Identifier: 110632590
GI number: 110632590
Start: 260426
End: 261436
Strand: Direct
Name: 110632590
Synonym: Meso_0229
Alternate gene names: NA
Gene position: 260426-261436 (Clockwise)
Preceding gene: 110632589
Following gene: 110632591
Centisome position: 5.9
GC content: 59.55
Gene sequence:
>1011_bases ATGGCTATCGTAGAAGATCGCCATTATAGGCAGCTCCTGACTGCCGCCGTTGCCAAGAGGCAGCGCGAAATTCAGGACAT CGTGTACAATGCGACCCCACTTACCCGCATCCTTCGGGATCAGGGCCGCATTCAGGTTAAGCGTGCTGGTGGCCCAGAGC TTCGCGTTCCCGTGGAATTCGAGAAGCTACAGGCTCAGTGGTTCACCGGGTACGACAAGATCGAGATCACTCCCAAGGAG CTGCTGAACTCGGCAGTCTTCAACTGGTCTCGCGTCGTCGGCATGTTCTCCCTTACGGGTACGGAACTGCTGTTCACGCG CGGCGAGGAAGAGGTGATCGACCTCATGTCGTTCTATGTCCGCGCTGCGGAAAAGAGCGTCAAGGAGGAATGGGAAACCT CGATTGTCGCTGACGGTACAGGCAACGGTGGACGGCAGATGATCGGCTTTGGCGGTGCCATTCCGATTGTACCGAATACC GGCGTCTATGGCGGTATCGACCGTGCGGAAGTTGCCAACTGGCGCACTAGCACGTTCAACGCTACCACTGACTTCACCGA TATCGGCACGGCCTGGGATTCCACGACCGCACGCCCGATCATTGAGCGCATTGCCCTCAATCGTTCGCGCAACGGTCAGT ACCCGGATCTGTGGATCTTCGACGCCTTGTCGTACCAAGCTGTCTCGGCTTCGTTCGTTGCGCATCAGCGCCTCGCAACG GAGCGTTCGGCTCGTCTCGGCTACAACGGCCTTGCCTACCACACCCCGGCTGGTCTGGTCGATCTGGTCGCAGCGGGCGG CGTCGGGAACGTCATGCCGGCGAATACTGCGTTCGGCATCGATACGTCCGCGCTTTCGATCTACGAGTTCCCCGGCCAGT CCTTCGTGCCCTTCCATCCGGGCGATGGGATGCGTCCCATCAACCAGGATGCGGTTGCGCAGGGCATTGTGTGGTCCGGT CAGCTCGTGCTCGAAAACCCGCTCTTCACTGTTCGCCTGATCACGGCGTAA
Upstream 100 bases:
>100_bases TGGTGCAGACACCGTGGTCGAGGAGGCTGAAACCGACCTTCGCGAGACGCTTCGCAAGGAACTGCGCAAGCTCTCCGCAT AATCCGAAAGGAACGAGCCC
Downstream 100 bases:
>100_bases CCGAAGAAAGGAAAAGATCATGGCTTTCCGCACTACTCCCCAGCTTGGTCAGCAACTCGATGAAGTTGGCGCCAACTATT GGGACCTGCTGGCCGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MAIVEDRHYRQLLTAAVAKRQREIQDIVYNATPLTRILRDQGRIQVKRAGGPELRVPVEFEKLQAQWFTGYDKIEITPKE LLNSAVFNWSRVVGMFSLTGTELLFTRGEEEVIDLMSFYVRAAEKSVKEEWETSIVADGTGNGGRQMIGFGGAIPIVPNT GVYGGIDRAEVANWRTSTFNATTDFTDIGTAWDSTTARPIIERIALNRSRNGQYPDLWIFDALSYQAVSASFVAHQRLAT ERSARLGYNGLAYHTPAGLVDLVAAGGVGNVMPANTAFGIDTSALSIYEFPGQSFVPFHPGDGMRPINQDAVAQGIVWSG QLVLENPLFTVRLITA
Sequences:
>Translated_336_residues MAIVEDRHYRQLLTAAVAKRQREIQDIVYNATPLTRILRDQGRIQVKRAGGPELRVPVEFEKLQAQWFTGYDKIEITPKE LLNSAVFNWSRVVGMFSLTGTELLFTRGEEEVIDLMSFYVRAAEKSVKEEWETSIVADGTGNGGRQMIGFGGAIPIVPNT GVYGGIDRAEVANWRTSTFNATTDFTDIGTAWDSTTARPIIERIALNRSRNGQYPDLWIFDALSYQAVSASFVAHQRLAT ERSARLGYNGLAYHTPAGLVDLVAAGGVGNVMPANTAFGIDTSALSIYEFPGQSFVPFHPGDGMRPINQDAVAQGIVWSG QLVLENPLFTVRLITA >Mature_335_residues AIVEDRHYRQLLTAAVAKRQREIQDIVYNATPLTRILRDQGRIQVKRAGGPELRVPVEFEKLQAQWFTGYDKIEITPKEL LNSAVFNWSRVVGMFSLTGTELLFTRGEEEVIDLMSFYVRAAEKSVKEEWETSIVADGTGNGGRQMIGFGGAIPIVPNTG VYGGIDRAEVANWRTSTFNATTDFTDIGTAWDSTTARPIIERIALNRSRNGQYPDLWIFDALSYQAVSASFVAHQRLATE RSARLGYNGLAYHTPAGLVDLVAAGGVGNVMPANTAFGIDTSALSIYEFPGQSFVPFHPGDGMRPINQDAVAQGIVWSGQ LVLENPLFTVRLITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36991; Mature: 36860
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVEDRHYRQLLTAAVAKRQREIQDIVYNATPLTRILRDQGRIQVKRAGGPELRVPVEF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEEECCHH EKLQAQWFTGYDKIEITPKELLNSAVFNWSRVVGMFSLTGTELLFTRGEEEVIDLMSFYV HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHHHHHHHHH RAAEKSVKEEWETSIVADGTGNGGRQMIGFGGAIPIVPNTGVYGGIDRAEVANWRTSTFN HHHHHHHHHHHCCEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCHHHHCCCCCCCCC ATTDFTDIGTAWDSTTARPIIERIALNRSRNGQYPDLWIFDALSYQAVSASFVAHQRLAT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH ERSARLGYNGLAYHTPAGLVDLVAAGGVGNVMPANTAFGIDTSALSIYEFPGQSFVPFHP HHHHHCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC GDGMRPINQDAVAQGIVWSGQLVLENPLFTVRLITA CCCCCCCCHHHHHHCEEECCEEEEECCCEEEEEEEC >Mature Secondary Structure AIVEDRHYRQLLTAAVAKRQREIQDIVYNATPLTRILRDQGRIQVKRAGGPELRVPVEF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEEECCHH EKLQAQWFTGYDKIEITPKELLNSAVFNWSRVVGMFSLTGTELLFTRGEEEVIDLMSFYV HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHHHHHHHHH RAAEKSVKEEWETSIVADGTGNGGRQMIGFGGAIPIVPNTGVYGGIDRAEVANWRTSTFN HHHHHHHHHHHCCEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCHHHHCCCCCCCCC ATTDFTDIGTAWDSTTARPIIERIALNRSRNGQYPDLWIFDALSYQAVSASFVAHQRLAT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH ERSARLGYNGLAYHTPAGLVDLVAAGGVGNVMPANTAFGIDTSALSIYEFPGQSFVPFHP HHHHHCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC GDGMRPINQDAVAQGIVWSGQLVLENPLFTVRLITA CCCCCCCCHHHHHHCEEECCEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA