Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632589
Identifier: 110632589
GI number: 110632589
Start: 259136
End: 260407
Strand: Direct
Name: 110632589
Synonym: Meso_0228
Alternate gene names: NA
Gene position: 259136-260407 (Clockwise)
Preceding gene: 110632588
Following gene: 110632590
Centisome position: 5.87
GC content: 60.77
Gene sequence:
>1272_bases ATGATGGAAACCACCACGGTCGAGCAGCCGGGGACGGTGGCGCTTGAGCCGCCTTCCACGGTCCTTAATCCTGATACGGT CAAGAACCCAAGCGGGGGCGGTCAGCCCCCCTTGAGCGATCAGGCACCATCGGTCGAATCCGTTCTAGAAGGCGAGCTTG CACGCCTGAAGGAAGAGGATGTGAAGGCTGAGAAGCCTGAGGCCAAGCCCGAGAAAGAGCCTAAGGACGCACCGAAGGAA GCGGCAAAGGTCGAGGACGACAAGGCAAAGGCCGAAGACAAGACGGCCAAGCAACGGGATGAGACGGGCAAGTTTGCCAA AGCCGAGAAGCCTGCCGAGCAGGTAGAGGCCAAGGCAGAAAAGGGCGCGCCTGAGCAGGCCGCAGCCGAGCGGAGCGCGC CGGAGGAAACCCGCCAGTCTGAGGGGCGGAAGTACGCCGAGCCGCCCGCTCGGTTCCTGCCGGAGGCTCGCACCAAATGG GCAAACGTTCCCAACGAGGTAAAGGCGGAGTTTCACCGCGTTTCTGAGGAGTTTGAACGCGAGCTTCAGGAGCATAAGCA GTTTCGCGAAGAGCTGCGCGAATACGAGGATTTAGCTAAGCAGCACAATGTGACCGTCAAGGACACGATGGCTCGCTATG TCGCCGCTGATCGGCATCTAAACCAGAACTTCGGCCAAGGCGTGGCGCAACTCATGCAGATGTACGGCCACAACCCGGCA CAGGGTCTTTCTGCCATCATGCAGGCCCTTGGGGTCACGCCGCAACAGTTTGCCGAGTATGTGACGAAGAACCCGCAGGT CGCGGCTGCGCCGCAGTCTCCTCGCCCGCAAGCACCACAGCAGCAAACGCTTCCGCCGCAAATGCAGGAGCTTCAGCGCG AAGTGCAGGAACTCAAATCGCAGCTTGTGACGCAGACGGTCTCGCCCATTATCGAGCGCTTTGCGTCCGAGCATCCAGAC TATCGCACGCTGGAGCCGCAGATTGTTGCGGTCCTTAAGTCCGGCGTGATCGAAGAACTTTACGGCACCGGCTTGTCGCC GGAACGGAAGCTCGCAGAGGCGTACCGGATAGCTGGTGGGAATCTCTCACCTTCACGTTCCGTGCCAGAGCCCGTTCCCG CACACTCCGAGCCGAAACCCGTGCCTTCCAACGATGCTGGCATGAAATCCATCCGTGGCGCTCCCGACGATGGTGCAGAC ACCGTGGTCGAGGAGGCTGAAACCGACCTTCGCGAGACGCTTCGCAAGGAACTGCGCAAGCTCTCCGCATAA
Upstream 100 bases:
>100_bases ATGATATTCGCGCGGCAAAGGCTGACCTCGATGCTGGCTGGCGTCCAGAGGTCGTAGCACTGGAAGACTGACCAGCCTCC TTTCCTCAGACAAGGATATC
Downstream 100 bases:
>100_bases TCCGAAAGGAACGAGCCCATGGCTATCGTAGAAGATCGCCATTATAGGCAGCTCCTGACTGCCGCCGTTGCCAAGAGGCA GCGCGAAATTCAGGACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MMETTTVEQPGTVALEPPSTVLNPDTVKNPSGGGQPPLSDQAPSVESVLEGELARLKEEDVKAEKPEAKPEKEPKDAPKE AAKVEDDKAKAEDKTAKQRDETGKFAKAEKPAEQVEAKAEKGAPEQAAAERSAPEETRQSEGRKYAEPPARFLPEARTKW ANVPNEVKAEFHRVSEEFERELQEHKQFREELREYEDLAKQHNVTVKDTMARYVAADRHLNQNFGQGVAQLMQMYGHNPA QGLSAIMQALGVTPQQFAEYVTKNPQVAAAPQSPRPQAPQQQTLPPQMQELQREVQELKSQLVTQTVSPIIERFASEHPD YRTLEPQIVAVLKSGVIEELYGTGLSPERKLAEAYRIAGGNLSPSRSVPEPVPAHSEPKPVPSNDAGMKSIRGAPDDGAD TVVEEAETDLRETLRKELRKLSA
Sequences:
>Translated_423_residues MMETTTVEQPGTVALEPPSTVLNPDTVKNPSGGGQPPLSDQAPSVESVLEGELARLKEEDVKAEKPEAKPEKEPKDAPKE AAKVEDDKAKAEDKTAKQRDETGKFAKAEKPAEQVEAKAEKGAPEQAAAERSAPEETRQSEGRKYAEPPARFLPEARTKW ANVPNEVKAEFHRVSEEFERELQEHKQFREELREYEDLAKQHNVTVKDTMARYVAADRHLNQNFGQGVAQLMQMYGHNPA QGLSAIMQALGVTPQQFAEYVTKNPQVAAAPQSPRPQAPQQQTLPPQMQELQREVQELKSQLVTQTVSPIIERFASEHPD YRTLEPQIVAVLKSGVIEELYGTGLSPERKLAEAYRIAGGNLSPSRSVPEPVPAHSEPKPVPSNDAGMKSIRGAPDDGAD TVVEEAETDLRETLRKELRKLSA >Mature_423_residues MMETTTVEQPGTVALEPPSTVLNPDTVKNPSGGGQPPLSDQAPSVESVLEGELARLKEEDVKAEKPEAKPEKEPKDAPKE AAKVEDDKAKAEDKTAKQRDETGKFAKAEKPAEQVEAKAEKGAPEQAAAERSAPEETRQSEGRKYAEPPARFLPEARTKW ANVPNEVKAEFHRVSEEFERELQEHKQFREELREYEDLAKQHNVTVKDTMARYVAADRHLNQNFGQGVAQLMQMYGHNPA QGLSAIMQALGVTPQQFAEYVTKNPQVAAAPQSPRPQAPQQQTLPPQMQELQREVQELKSQLVTQTVSPIIERFASEHPD YRTLEPQIVAVLKSGVIEELYGTGLSPERKLAEAYRIAGGNLSPSRSVPEPVPAHSEPKPVPSNDAGMKSIRGAPDDGAD TVVEEAETDLRETLRKELRKLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46672; Mature: 46672
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMETTTVEQPGTVALEPPSTVLNPDTVKNPSGGGQPPLSDQAPSVESVLEGELARLKEED CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VKAEKPEAKPEKEPKDAPKEAAKVEDDKAKAEDKTAKQRDETGKFAKAEKPAEQVEAKAE HHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH KGAPEQAAAERSAPEETRQSEGRKYAEPPARFLPEARTKWANVPNEVKAEFHRVSEEFER CCCCHHHHHHCCCCHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH ELQEHKQFREELREYEDLAKQHNVTVKDTMARYVAADRHLNQNFGQGVAQLMQMYGHNPA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QGLSAIMQALGVTPQQFAEYVTKNPQVAAAPQSPRPQAPQQQTLPPQMQELQREVQELKS HHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QLVTQTVSPIIERFASEHPDYRTLEPQIVAVLKSGVIEELYGTGLSPERKLAEAYRIAGG HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC NLSPSRSVPEPVPAHSEPKPVPSNDAGMKSIRGAPDDGADTVVEEAETDLRETLRKELRK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSA HCC >Mature Secondary Structure MMETTTVEQPGTVALEPPSTVLNPDTVKNPSGGGQPPLSDQAPSVESVLEGELARLKEED CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VKAEKPEAKPEKEPKDAPKEAAKVEDDKAKAEDKTAKQRDETGKFAKAEKPAEQVEAKAE HHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH KGAPEQAAAERSAPEETRQSEGRKYAEPPARFLPEARTKWANVPNEVKAEFHRVSEEFER CCCCHHHHHHCCCCHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH ELQEHKQFREELREYEDLAKQHNVTVKDTMARYVAADRHLNQNFGQGVAQLMQMYGHNPA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QGLSAIMQALGVTPQQFAEYVTKNPQVAAAPQSPRPQAPQQQTLPPQMQELQREVQELKS HHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QLVTQTVSPIIERFASEHPDYRTLEPQIVAVLKSGVIEELYGTGLSPERKLAEAYRIAGG HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC NLSPSRSVPEPVPAHSEPKPVPSNDAGMKSIRGAPDDGADTVVEEAETDLRETLRKELRK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA