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The map label for this gene is yhdE [C]

Identifier: 110632548

GI number: 110632548

Start: 230273

End: 230902

Strand: Reverse

Name: yhdE [C]

Synonym: Meso_0186

Alternate gene names: 110632548

Gene position: 230902-230273 (Counterclockwise)

Preceding gene: 110632549

Following gene: 110632547

Centisome position: 5.23

GC content: 60.63

Gene sequence:

>630_bases
ATGAGCGCACCCACCAAACTTATCCTTGCGTCGGCTTCGCCCCGGCGGGTGCAGCTCCTGCAACAGGCGGGGCTGGAGCC
GAATCGGCTTGTTCCGGCGGAAATCGACGAAACGCCGCTGAAGGCGGAGCACCCACGTTCGCTGGCAAAGCGACTCGCAC
GCAGCAAAGCCGAAAAGGCACTGGAGCGACTGAGGAAGGACGGCGAAGAACGCGATTCCTTCGTGCTTGCGGCAGATACG
GTGGTGGCTGTCGGGCGGCGCATATTGCCGAAGACGGAGATCGCCGATGAGGCATCAAACTGTCTTCGTCTTCTTTCGGG
CCGTTCGCATCGGGTCTATACCGGCATATGCCTTTTCACCCCAACCGGTAAGCTTCGGCACAAGCTGGTGGAAACGCGCG
TGCGCTTCAAGCGCATCTCCCGAGAAGAACTGGAAGCCTATATCGCGTCCGGGGAATGGCGGGGAAAAGCGGGCGGCTAC
GCCATTCAGGGCCTGGCCGGCTCCTTCGTCGTCAAGCTGGTCGGTTCCTATACGAATGTGGTGGGCTTGCCACTCCATGA
AACGGTAAGCTTACTTGCCGCCGACGGGTTCAAAGCCTATCTGAACTGGCCGGCGGGGACACAAGTCTGA

Upstream 100 bases:

>100_bases
TTCTGACTGGCGATAAGGTTCTTGTGGAAATGACGCCATATGACCTGACCAAGGGCAGGATCACCTATCGCTTCAAATAG
CTGCGTTATCTAGCAGGGCA

Downstream 100 bases:

>100_bases
CCTATGGCTGGTGCGACTGAAAAGGCTGAAAAGATCACGCCGCTGCGGCCCAAGCGGCCCTGCCCTGAATGCGGCAAACC
CTCGTCGCGCGAGTTCTATC

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSAPTKLILASASPRRVQLLQQAGLEPNRLVPAEIDETPLKAEHPRSLAKRLARSKAEKALERLRKDGEERDSFVLAADT
VVAVGRRILPKTEIADEASNCLRLLSGRSHRVYTGICLFTPTGKLRHKLVETRVRFKRISREELEAYIASGEWRGKAGGY
AIQGLAGSFVVKLVGSYTNVVGLPLHETVSLLAADGFKAYLNWPAGTQV

Sequences:

>Translated_209_residues
MSAPTKLILASASPRRVQLLQQAGLEPNRLVPAEIDETPLKAEHPRSLAKRLARSKAEKALERLRKDGEERDSFVLAADT
VVAVGRRILPKTEIADEASNCLRLLSGRSHRVYTGICLFTPTGKLRHKLVETRVRFKRISREELEAYIASGEWRGKAGGY
AIQGLAGSFVVKLVGSYTNVVGLPLHETVSLLAADGFKAYLNWPAGTQV
>Mature_208_residues
SAPTKLILASASPRRVQLLQQAGLEPNRLVPAEIDETPLKAEHPRSLAKRLARSKAEKALERLRKDGEERDSFVLAADTV
VAVGRRILPKTEIADEASNCLRLLSGRSHRVYTGICLFTPTGKLRHKLVETRVRFKRISREELEAYIASGEWRGKAGGYA
IQGLAGSFVVKLVGSYTNVVGLPLHETVSLLAADGFKAYLNWPAGTQV

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=39.2670157068063, Blast_Score=110, Evalue=8e-25,
Organism=Homo sapiens, GI291045183, Length=191, Percent_Identity=36.6492146596859, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI291045181, Length=142, Percent_Identity=39.4366197183099, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI310133124, Length=147, Percent_Identity=39.4557823129252, Blast_Score=87, Evalue=8e-18,
Organism=Escherichia coli, GI1789646, Length=189, Percent_Identity=42.3280423280423, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI87081830, Length=193, Percent_Identity=32.1243523316062, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193202443, Length=181, Percent_Identity=34.2541436464088, Blast_Score=97, Evalue=5e-21,
Organism=Drosophila melanogaster, GI78706856, Length=184, Percent_Identity=35.8695652173913, Blast_Score=107, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y186_MESSB (Q11LY4)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_672756.1
- ProteinModelPortal:   Q11LY4
- SMR:   Q11LY4
- STRING:   Q11LY4
- GeneID:   4179747
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_0186
- NMPDR:   fig|266779.1.peg.3344
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- PhylomeDB:   Q11LY4
- ProtClustDB:   PRK01441
- BioCyc:   MSP266779:MESO_0186-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 22940; Mature: 22809

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: ACT_SITE 37-37

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPTKLILASASPRRVQLLQQAGLEPNRLVPAEIDETPLKAEHPRSLAKRLARSKAEKA
CCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LERLRKDGEERDSFVLAADTVVAVGRRILPKTEIADEASNCLRLLSGRSHRVYTGICLFT
HHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PTGKLRHKLVETRVRFKRISREELEAYIASGEWRGKAGGYAIQGLAGSFVVKLVGSYTNV
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHE
VGLPLHETVSLLAADGFKAYLNWPAGTQV
ECCCHHHHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure 
SAPTKLILASASPRRVQLLQQAGLEPNRLVPAEIDETPLKAEHPRSLAKRLARSKAEKA
CCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LERLRKDGEERDSFVLAADTVVAVGRRILPKTEIADEASNCLRLLSGRSHRVYTGICLFT
HHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PTGKLRHKLVETRVRFKRISREELEAYIASGEWRGKAGGYAIQGLAGSFVVKLVGSYTNV
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHE
VGLPLHETVSLLAADGFKAYLNWPAGTQV
ECCCHHHHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA