| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632547
Identifier: 110632547
GI number: 110632547
Start: 230057
End: 230269
Strand: Reverse
Name: 110632547
Synonym: Meso_0185
Alternate gene names: NA
Gene position: 230269-230057 (Counterclockwise)
Preceding gene: 110632548
Following gene: 110632545
Centisome position: 5.22
GC content: 57.28
Gene sequence:
>213_bases ATGGCTGGTGCGACTGAAAAGGCTGAAAAGATCACGCCGCTGCGGCCCAAGCGGCCCTGCCCTGAATGCGGCAAACCCTC GTCGCGCGAGTTCTATCCGTTTTGTTCCAAACGCTGCAAAGACATCGACCTGAATAGATGGCTATCGGGGTCTTATGTCA TTCCCGGCCGCCCGGCGGAGGAAGAAGAGGACGAATCAGGATCGGCCCAATAA
Upstream 100 bases:
>100_bases GAATGTGGTGGGCTTGCCACTCCATGAAACGGTAAGCTTACTTGCCGCCGACGGGTTCAAAGCCTATCTGAACTGGCCGG CGGGGACACAAGTCTGACCT
Downstream 100 bases:
>100_bases AAAAGCCCGGCTCCAGAGAGCCGGGCAGGTTTGCAGGCAGCCGGGGGGAACCGGCGTGATGGGAGTAAATGCCTGCATGA ACGGTTGATCAGGGTCGGCG
Product: zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MAGATEKAEKITPLRPKRPCPECGKPSSREFYPFCSKRCKDIDLNRWLSGSYVIPGRPAEEEEDESGSAQ
Sequences:
>Translated_70_residues MAGATEKAEKITPLRPKRPCPECGKPSSREFYPFCSKRCKDIDLNRWLSGSYVIPGRPAEEEEDESGSAQ >Mature_69_residues AGATEKAEKITPLRPKRPCPECGKPSSREFYPFCSKRCKDIDLNRWLSGSYVIPGRPAEEEEDESGSAQ
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005584 - InterPro: IPR013088 [H]
Pfam domain/function: PF03884 DUF329 [H]
EC number: NA
Molecular weight: Translated: 7832; Mature: 7701
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGATEKAEKITPLRPKRPCPECGKPSSREFYPFCSKRCKDIDLNRWLSGSYVIPGRPAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCC EEEDESGSAQ CCCCCCCCCC >Mature Secondary Structure AGATEKAEKITPLRPKRPCPECGKPSSREFYPFCSKRCKDIDLNRWLSGSYVIPGRPAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCC EEEDESGSAQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]